[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#681108: ITP: norsnet -- NORSnet - identifies unstructured loops from sequence



Hello,

Laszlo changed already the short description a couple of times.

The current version (r11734) in the svn is:
"Description: tool to identify unstructured loops in proteins"
2 revisions earlier (r11732) he had this description:
"Description: tool to identify unstructured loops from protein sequence or alignment"

Kind regards
Christian

Am 11.07.2012 14:38, schrieb Andreas Tille:
Hi, 

thanks for the ITP.  Please make sure the short description would be
easy to dectect as relevant for biological research.  There are a lot
of sequences out there.  Some kind of

   s/from sequence/from protein sequence/

to get

   Description: NORSnet - identifies unstructured loops from protein sequence

would be sufficient to enable the general user to detect this but you
might find some even better fitting description.

Kind regards

       Andreas.

On Tue, Jul 10, 2012 at 05:24:55PM +0000, mertes@in.tum.de wrote:
Package: wnpp
Severity: wishlist
Owner: mertes@in.tum.de


* Package name    : norsnet
  Version         : 1.0.10
  Upstream Author : Guy Yachdav <gyachdav@rostlab.org>
* URL             : http://www.rostlab.org/
* License         : GPL
  Programming Lang: Perl
  Description     : NORSnet - identifies unstructured loops from sequence
NORSnet was trained to distinguish between very long contiguous segments with
non-regular secondary structure (NORS regions) and well-folded proteins.
NORSnet was trained on predicted information rather than on experimental data.
Therefore, it was optimized on a large data, which is not biased by today's
experimental means of capturing disorder. Thus, NORSnet reached into regions
in sequence space that are not covered by the specialized disorder predictors.
One disadvantage of this approach is that it is not optimal for the
identification of the "average" disordered region.



-- 
To UNSUBSCRIBE, email to debian-devel-REQUEST@lists.debian.org
with a subject of "unsubscribe". Trouble? Contact listmaster@lists.debian.org
Archive: [🔎] 20120710172455.3292.67877.reportbug@i12r-tbl.informatik.tu-muenchen.de">http://lists.debian.org/[🔎] 20120710172455.3292.67877.reportbug@i12r-tbl.informatik.tu-muenchen.de



    



Reply to: