Bug#286167: marked as done (ITP: cluster3 -- Reimplementation of the Eisen-clustering sofware [med-bio])
Your message dated Tue, 31 Jul 2012 19:17:08 +0000
with message-id <E1SwHwK-0000uN-O7@franck.debian.org>
and subject line Bug#286167: fixed in cluster3 1.50-1
has caused the Debian Bug report #286167,
regarding ITP: cluster3 -- Reimplementation of the Eisen-clustering sofware [med-bio]
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
286167: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=286167
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--- Begin Message ---
Package: wnpp
Severity: wishlist
* Package name : cluster3
Version : 1.27
Upstream Author : M. J. L. de Hoon <mdehoon@ims.u-tokyo.ac.jp>, S. Imoto, J. Nolan, and S. Miyano
* URL : http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/
* License : non-free
Description : [Biology] Reimplementation of the Eisen-clustering
software
The clustering software by Michael Eisen is well known and accepted in
the Bioinfromatics community. This package represents a reimplementation
and extension of the Windows program.
.
This software implements clustering routines that can be used to analyze
gene expression data. Routines for hierarchical (pairwise simple,
complete, average, and centroid linkage) clustering, k-means and
k-medians clustering, and 2D self-organizing maps are included. The
routines are available in the form of a C clustering library, an
extension module to Python, a module to Perl, as well as an enhanced
version of Cluster, which was originally developed by Michael Eisen
of Berkeley Lab. The C clustering library and the associated extension
module for Python was released under the Python license. The Perl module
was released under the Artistic License. Cluster 3.0 is covered by the
original Cluster/TreeView license.
.
This package contains the command line and motif gui versions
of Cluster 3.0.
.
Homepage: http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/
An inital effort to provide a package is available from
http://bioinformatics.pzr.uni-rostock.de/~moeller/debian/cluster3
-- System Information:
Debian Release: 3.1
APT prefers testing
APT policy: (500, 'testing')
Architecture: i386 (i686)
Kernel: Linux 2.6.9
--- End Message ---
--- Begin Message ---
Source: cluster3
Source-Version: 1.50-1
We believe that the bug you reported is fixed in the latest version of
cluster3, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 286167@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Thorsten Alteholz <debian@alteholz.de> (supplier of updated cluster3 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Wed, 18 Jul 2012 18:00:00 +0200
Source: cluster3
Binary: cluster3
Architecture: source amd64
Version: 1.50-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Thorsten Alteholz <debian@alteholz.de>
Description:
cluster3 - Reimplementation of the Eisen-clustering software
Closes: 286167
Changes:
cluster3 (1.50-1) unstable; urgency=low
.
[ Thorsten Alteholz ]
* New upstream release (1.50).
* debian/rules: target get-orig-source added
.
[ Steffen Moeller ]
* New upstream release (1.40).
* Improved on debian/rules.
* Finally submitted ITP (Closes: Bug#286167).
.
[ Charles Plessy ]
* Initial release.
* Manpage built before source package generation, removed docbook-to-man
build dependency.
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Files:
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--- End Message ---
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