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Bug#673139: marked as done (ITP: jgromacs -- library for trajectory analysis in molecular dynamics)



Your message dated Mon, 21 May 2012 10:19:46 +0000
with message-id <E1SWPiM-0003df-G6@franck.debian.org>
and subject line Bug#673139: fixed in jgromacs 1.0-1
has caused the Debian Bug report #673139,
regarding ITP: jgromacs -- library for trajectory analysis in molecular dynamics
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
673139: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=673139
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>

* Package name    : jgromacs
  Version         : 1.0
* URL             : http://nanomed.bioch.ox.ac.uk/jgromacs/
* License         : GPL3
  Programming Lang: Java
  Description     : library for trajectory analysis in molecular dynamics

 JGromacs is a Java library designed to facilitate the development
 of cross-platform analysis applications for Molecular Dynamics (MD)
 simulations. The package contains parsers for file formats applied by
 GROMACS (GROningen MAchine for Chemical Simulations), one of the most
 widely used MD simulation packages.
 .
 JGromacs provides a multilevel object-oriented representation of
 simulation data to integrate and interconvert sequence, structure
 and dynamics information. In addititon, a basic analysis toolkit is
 included in the package. The programmer is also provided with simple
 tools (e.g. XML-based configuration) to create applications with a user
 interface resembling the command-line UI of Gromacs applications.

Packaging instructions live on
http://anonscm.debian.org/viewvc/debichem/unstable/jgromacs

Steffen



--- End Message ---
--- Begin Message ---
Source: jgromacs
Source-Version: 1.0-1

We believe that the bug you reported is fixed in the latest version of
jgromacs, which is due to be installed in the Debian FTP archive:

jgromacs_1.0-1.debian.tar.gz
  to main/j/jgromacs/jgromacs_1.0-1.debian.tar.gz
jgromacs_1.0-1.dsc
  to main/j/jgromacs/jgromacs_1.0-1.dsc
jgromacs_1.0.orig.tar.gz
  to main/j/jgromacs/jgromacs_1.0.orig.tar.gz
libjgromacs-java-doc_1.0-1_all.deb
  to main/j/jgromacs/libjgromacs-java-doc_1.0-1_all.deb
libjgromacs-java_1.0-1_all.deb
  to main/j/jgromacs/libjgromacs-java_1.0-1_all.deb



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 673139@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated jgromacs package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: RIPEMD160

Format: 1.8
Date: Wed, 16 May 2012 14:12:46 +0200
Source: jgromacs
Binary: libjgromacs-java libjgromacs-java-doc
Architecture: source all
Version: 1.0-1
Distribution: unstable
Urgency: low
Maintainer: Michael Banck <mbanck@debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description: 
 libjgromacs-java - library for molecular dynamics trajectory analysis
 libjgromacs-java-doc - library for molecular dynamics trajectory analysis (documentation
Closes: 673139
Changes: 
 jgromacs (1.0-1) unstable; urgency=low
 .
   * Initial release (Closes: #673139)
Checksums-Sha1: 
 8796c09d0028f57f5d16841cf01729689f39f74c 1362 jgromacs_1.0-1.dsc
 3b9464aeb940c789418f946b97e3f468a5bd4ac5 77568 jgromacs_1.0.orig.tar.gz
 92be674a144d764d0fb36a4d0b24cdfd8d60fb0c 3597 jgromacs_1.0-1.debian.tar.gz
 7310219cc98d92c94932ecc69b77a265d608cdc8 86740 libjgromacs-java_1.0-1_all.deb
 feaeb8ffc4d9fc4896abd9bf33bb72745ee4d759 88706 libjgromacs-java-doc_1.0-1_all.deb
Checksums-Sha256: 
 89cfc828bd25ae9b3440fa93b5c9d2b5ac650f23bced186cf9fd2400a196f08e 1362 jgromacs_1.0-1.dsc
 14512d525f70524b09ccd42770b9af21d7c0c239a8471cbbea363acf1cafd35c 77568 jgromacs_1.0.orig.tar.gz
 e49d57f46d6cecd9cdeedb7b4fbfc7ac24d149cde1244ab1a586d09492f430c7 3597 jgromacs_1.0-1.debian.tar.gz
 5b517fbfab3d1fbe623ca89814503995f6e2fbd75b2cf1fc1588272f5312bc4f 86740 libjgromacs-java_1.0-1_all.deb
 75a88e8b1b028a0aa8392c3f1a9eb583bedab42d14106368f1eb06264a81fe15 88706 libjgromacs-java-doc_1.0-1_all.deb
Files: 
 032ded51cdbdd53021a019d256a0b4df 1362 science extra jgromacs_1.0-1.dsc
 2126c21fc085039d07128cc89d2ad746 77568 science extra jgromacs_1.0.orig.tar.gz
 e2b3995a1ef288d0cb8f9d98efb9e11c 3597 science extra jgromacs_1.0-1.debian.tar.gz
 c4b3b51c007ac90b6d01c520d4011c06 86740 java extra libjgromacs-java_1.0-1_all.deb
 afb8711818d64b002a82ee008794a521 88706 doc extra libjgromacs-java-doc_1.0-1_all.deb

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