Bug#622700: marked as done (ITP: fastx-toolkit -- FASTQ/A short nucleotide reads pre-processing tools)
Your message dated Mon, 18 Apr 2011 19:47:08 +0000
with message-id <E1QBuPc-00028F-Km@franck.debian.org>
and subject line Bug#622700: fixed in fastx-toolkit 0.0.13-1
has caused the Debian Bug report #622700,
regarding ITP: fastx-toolkit -- FASTQ/A short nucleotide reads pre-processing tools
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
622700: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=622700
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <plessy@debian.org>
Package name : fastx-toolkit
Version : 0.0.13
Upstream Author : Assaf Gordon <gordon@cshl.edu>
URL : http://hannonlab.cshl.edu/fastx_toolkit/
License : AGPL-3+, MIT
Programming Lang: C
Description : FASTQ/A short nucleotide reads pre-processing tools
The FASTX-Toolkit is a collection of command line tools for preprocessing
short nucleotide reads in FASTA and FASTQ formats, usually produced by
Next-Generation sequencing machines. The main processing of such FASTA/FASTQ
files is mapping (aligning) the sequences to reference genomes or other
databases using specialized programs like BWA, Bowtie and many many others.
However, it is sometimes more productive to preprocess the FASTA/FASTQ files
before mapping the sequences to the genome—manipulating the sequences to
produce better mapping results. The FASTX-Toolkit tools perform some of these
preprocessing tasks.
--- End Message ---
--- Begin Message ---
Source: fastx-toolkit
Source-Version: 0.0.13-1
We believe that the bug you reported is fixed in the latest version of
fastx-toolkit, which is due to be installed in the Debian FTP archive:
fastx-toolkit_0.0.13-1.debian.tar.gz
to main/f/fastx-toolkit/fastx-toolkit_0.0.13-1.debian.tar.gz
fastx-toolkit_0.0.13-1.dsc
to main/f/fastx-toolkit/fastx-toolkit_0.0.13-1.dsc
fastx-toolkit_0.0.13-1_amd64.deb
to main/f/fastx-toolkit/fastx-toolkit_0.0.13-1_amd64.deb
fastx-toolkit_0.0.13.orig.tar.bz2
to main/f/fastx-toolkit/fastx-toolkit_0.0.13.orig.tar.bz2
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 622700@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Charles Plessy <plessy@debian.org> (supplier of updated fastx-toolkit package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 14 Apr 2011 14:00:57 +0900
Source: fastx-toolkit
Binary: fastx-toolkit
Architecture: source amd64
Version: 0.0.13-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description:
fastx-toolkit - FASTQ/A short nucleotide reads pre-processing tools
Closes: 622700
Changes:
fastx-toolkit (0.0.13-1) unstable; urgency=low
.
* Initial release (Closes: #622700)
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