Bug#617340: marked as done (ITP: seq-gen -- simulate the evolution of nucleotide or amino acid sequences)
Your message dated Tue, 12 Apr 2011 22:04:43 +0000
with message-id <E1Q9lhT-00015j-UK@franck.debian.org>
and subject line Bug#617340: fixed in seq-gen 1.3.2-1
has caused the Debian Bug report #617340,
regarding ITP: seq-gen -- simulate the evolution of nucleotide or amino acid sequences
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
617340: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=617340
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Alex Mestiashvili<alex@biotec.tu-dresden.de>
* Package name : seq-gen
Version : 1.3.2
Upstream Author : Andrew Rambaut<andrew.rambaut@zoo.ox.ac.uk>
* URL : http://tree.bio.ed.ac.uk/software/seqgen/
* License : GPL
Programming Lang: C
Description : simulate the evolution of nucleotide or amino acid sequences
Seq-Gen is a program that will simulate the evolution of nucleotide
or amino acid sequences along a phylogeny, using common models of the
substitution process. A range of models of molecular evolution are
implemented including the general reversible model. State frequencies
and other parameters of the model may be given and site-specific rate
heterogeneity may also be incorporated in a number of ways. Any number
of trees may be read in and the program will produce any number of data
sets for each tree. Thus large sets of replicate simulations can be
easily created. It has been designed to be a general purpose simulator
that incorporates most of the commonly used
(and computationally tractable) models of molecular sequence evolution.
--- End Message ---
--- Begin Message ---
Source: seq-gen
Source-Version: 1.3.2-1
We believe that the bug you reported is fixed in the latest version of
seq-gen, which is due to be installed in the Debian FTP archive:
seq-gen_1.3.2-1.debian.tar.gz
to main/s/seq-gen/seq-gen_1.3.2-1.debian.tar.gz
seq-gen_1.3.2-1.dsc
to main/s/seq-gen/seq-gen_1.3.2-1.dsc
seq-gen_1.3.2-1_amd64.deb
to main/s/seq-gen/seq-gen_1.3.2-1_amd64.deb
seq-gen_1.3.2.orig.tar.gz
to main/s/seq-gen/seq-gen_1.3.2.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 617340@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alex Mestiashvili <alex@biotec.tu-dresden.de> (supplier of updated seq-gen package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 03 Mar 2011 14:58:34 +0000
Source: seq-gen
Binary: seq-gen
Architecture: source amd64
Version: 1.3.2-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Alex Mestiashvili <alex@biotec.tu-dresden.de>
Description:
seq-gen - simulate the evolution of nucleotide or amino acid sequences
Closes: 617340
Changes:
seq-gen (1.3.2-1) unstable; urgency=low
.
* Initial release (Closes: #617340)
Checksums-Sha1:
cbb139d1e7cc8e6dca3c5d4974e1c107ca0ad281 1303 seq-gen_1.3.2-1.dsc
43fdec3556b204a4a9584bdb474202eee853dd71 57305 seq-gen_1.3.2.orig.tar.gz
95e636f450dfd7f4da5ec30788fe8e429db4ebd5 4802 seq-gen_1.3.2-1.debian.tar.gz
11004a97797927e4b1c9dc554a8a5106429184ec 74972 seq-gen_1.3.2-1_amd64.deb
Checksums-Sha256:
6734b6fd9daca6b19e614fe796cf882fa6f896804b699eebac858bbd6081dc87 1303 seq-gen_1.3.2-1.dsc
024ae534c4d12010f8cec747419f35d600dd6c74d4ff39a28c57787ac8c8b2a8 57305 seq-gen_1.3.2.orig.tar.gz
24ef5329add9c4c1443b770db4252e8dcd1c73a03ac5fc2e66fbf113efc9991d 4802 seq-gen_1.3.2-1.debian.tar.gz
199931683d95bddbcf875438c64a1427a02e5b95a156a7216c062c4f1dd6a52c 74972 seq-gen_1.3.2-1_amd64.deb
Files:
7e73dec1d8289f8fa2a8b75d141cc627 1303 science optional seq-gen_1.3.2-1.dsc
53bc4ed543a8cdd3f99d4bed01d87bee 57305 science optional seq-gen_1.3.2.orig.tar.gz
ed36c785f5a3b4a464c2e2ad4d23829d 4802 science optional seq-gen_1.3.2-1.debian.tar.gz
b3bc689a3d9352b0b7f808db7953b685 74972 science optional seq-gen_1.3.2-1_amd64.deb
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--- End Message ---
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