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Bug#595958: marked as done (ITP: paml -- Phylogenetic Analysis by Maximum Likelihood)

Your message dated Fri, 31 Dec 2010 12:47:16 +0000
with message-id <E1PYeO4-0002FI-A3@franck.debian.org>
and subject line Bug#595958: fixed in paml 4.4c-1
has caused the Debian Bug report #595958,
regarding ITP: paml -- Phylogenetic Analysis by Maximum Likelihood
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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immediately.)


-- 
595958: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=595958
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>

* Package name    : paml
* URL             : http://abacus.gene.ucl.ac.uk/software/paml.html
* License         : academics only
  Description     : Phylogenetic Analysis by Maximum Likelihood

PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. It is maintained and distributed for academic use free of charge by Ziheng Yang.
PAML is not good for tree making. It may be used to estimate parameters and test hypotheses to study the evolutionary process, when you have reconstructed trees using other programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc.

--- End Message ---
--- Begin Message --- 
Source: paml
Source-Version: 4.4c-1

We believe that the bug you reported is fixed in the latest version of
paml, which is due to be installed in the Debian FTP archive:

paml-doc_4.4c-1_all.deb
  to main/p/paml/paml-doc_4.4c-1_all.deb
paml_4.4c-1.debian.tar.gz
  to main/p/paml/paml_4.4c-1.debian.tar.gz
paml_4.4c-1.dsc
  to main/p/paml/paml_4.4c-1.dsc
paml_4.4c-1_amd64.deb
  to main/p/paml/paml_4.4c-1_amd64.deb
paml_4.4c.orig.tar.gz
  to main/p/paml/paml_4.4c.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 595958@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Pjotr Prins <pjotr.debian@thebird.nl> (supplier of updated paml package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Tue, 07 Sep 2010 21:09:02 +0200
Source: paml
Binary: paml paml-doc
Architecture: source amd64 all
Version: 4.4c-1
Distribution: experimental
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Pjotr Prins <pjotr.debian@thebird.nl>
Description: 
 paml       - Phylogenetic Analysis by Maximum Likelihood (PAML)
 paml-doc   - Documentation for PAML
Closes: 595958
Changes: 
 paml (4.4c-1) experimental; urgency=low
 .
   * Initial release (Closes: #595958).
Checksums-Sha1: 
 c62d13fc6ebab9639495ef5c672aedd77651886b 1163 paml_4.4c-1.dsc
 fa2b7b0ef51ddc339b08b619125a1a4442d61bab 1864040 paml_4.4c.orig.tar.gz
 1127d6c8c49ece5ff5d1c24ba84478ba493f5f70 3217 paml_4.4c-1.debian.tar.gz
 de942f2ef94122f5cdd22f43739d6098c576c631 2886958 paml_4.4c-1_amd64.deb
 41349bbaabb5722ddd6465d8a675e95721079369 1078660 paml-doc_4.4c-1_all.deb
Checksums-Sha256: 
 fd4fcaf3362af43de54aac659a07c0d10912f5ab4f602796492c1c04a478c45e 1163 paml_4.4c-1.dsc
 87ecab01c57bd8b3b780efd54a1db0636c299d07f5c8f013fd2e3266007aad4f 1864040 paml_4.4c.orig.tar.gz
 731ea73e33bcbe36fed50e51caffda022da209aa54b991099ef2d60be96f7fe1 3217 paml_4.4c-1.debian.tar.gz
 94ff00121b5326726510cc0b2d8fb78efab06dc20b17f265d561fbc771a2cd2a 2886958 paml_4.4c-1_amd64.deb
 151d9f809d7761b4925129d062b6b1198837a7b19a106ac596db57c422741dc7 1078660 paml-doc_4.4c-1_all.deb
Files: 
 7409c27b4c3c942c6d072475281bce09 1163 science extra paml_4.4c-1.dsc
 99506329cfa19ad64d85dcbb8665e768 1864040 science extra paml_4.4c.orig.tar.gz
 9e8b5f226355b8309f52afa4508e7e60 3217 science extra paml_4.4c-1.debian.tar.gz
 57ed568ef5bd2591526e17b5fadfdb20 2886958 science extra paml_4.4c-1_amd64.deb
 029ba5f2bfd49b13fe627ece16158616 1078660 doc extra paml-doc_4.4c-1_all.deb

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