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Bug#491025: marked as done (ITP: biojava-live -- Java API to develop tools for bioinformatics research)

Your message dated Sun, 22 Mar 2009 22:34:39 +0000
with message-id <E1LlWFb-0006rI-Ek@ries.debian.org>
and subject line Bug#491025: fixed in biojava-live 1.6.1.svn.20090126-1
has caused the Debian Bug report #491025,
regarding ITP: biojava-live -- Java API to develop tools for bioinformatics research
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
491025: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=491025
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>

* Package name    : biojava-live
  Version         : 1.6.0
* URL             : http://www.biojava.org
* License         : LGPL
  Programming Lang: Java
  Description     : Java API to develop tools for bioinformatics research

 BioJava is an open-source project dedicated to providing a Java framework
 for processing biological data. It includes objects for manipulating
 sequences, file parsers, DAS client and server support, access to BioSQL
 and Ensembl databases, and powerful analysis and statistical routines
 including a dynamic programming toolkit.
 .
 BioJava is provided by a vibrant community which meets annually at
 the Bioinformatics Open Source Conference (BOSC) that traditionally
 accompanies the Intelligent Systems in Molecular Biology (ISMB)
 meeting. Much like BioPerl, the employment of this library is valuable
 for everybody active in the field because of the many tricks of the
 trade one learns just by communicating on the mailing list.

--- End Message ---
--- Begin Message --- 
Source: biojava-live
Source-Version: 1.6.1.svn.20090126-1

We believe that the bug you reported is fixed in the latest version of
biojava-live, which is due to be installed in the Debian FTP archive:

biojava-live_1.6.1.svn.20090126-1.diff.gz
  to pool/contrib/b/biojava-live/biojava-live_1.6.1.svn.20090126-1.diff.gz
biojava-live_1.6.1.svn.20090126-1.dsc
  to pool/contrib/b/biojava-live/biojava-live_1.6.1.svn.20090126-1.dsc
biojava-live_1.6.1.svn.20090126.orig.tar.gz
  to pool/contrib/b/biojava-live/biojava-live_1.6.1.svn.20090126.orig.tar.gz
libbiojava-java-demos_1.6.1.svn.20090126-1_all.deb
  to pool/contrib/b/biojava-live/libbiojava-java-demos_1.6.1.svn.20090126-1_all.deb
libbiojava-java-doc_1.6.1.svn.20090126-1_all.deb
  to pool/main/b/biojava-live/libbiojava-java-doc_1.6.1.svn.20090126-1_all.deb
libbiojava-java_1.6.1.svn.20090126-1_all.deb
  to pool/contrib/b/biojava-live/libbiojava-java_1.6.1.svn.20090126-1_all.deb
libbiojava1.6-java_1.6.1.svn.20090126-1_all.deb
  to pool/contrib/b/biojava-live/libbiojava1.6-java_1.6.1.svn.20090126-1_all.deb



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 491025@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated biojava-live package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Tue, 30 Dec 2008 19:55:36 +0100
Source: biojava-live
Binary: libbiojava1.6-java libbiojava-java libbiojava-java-demos libbiojava-java-doc
Architecture: source all
Version: 1.6.1.svn.20090126-1
Distribution: unstable
Urgency: low
Maintainer: Steffen Moeller <moeller@debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description: 
 libbiojava-java - Java API to biological data and applications
 libbiojava-java-demos - Example programs for BioJava
 libbiojava-java-doc - [Biology] Documentation for BioJava
 libbiojava1.6-java - Java API to biological data and applications
Closes: 491025
Changes: 
 biojava-live (1.6.1.svn.20090126-1) unstable; urgency=low
 .
   * Initial release (Closes:#491025).
   * Added dependency to quilt.
   * Moved -doc to section doc.
   * Added symlinks to jar file with pseudo-soname
   * Need to be placed in contrib section as a start because of dependency
     to libjgrapht that is still in contrib.
Checksums-Sha1: 
 40983095e45f2be83463ebab5ac2e6bbd19f31cd 1619 biojava-live_1.6.1.svn.20090126-1.dsc
 b287510b4c44a48d1ff48b56334589c515bbc1e1 9410533 biojava-live_1.6.1.svn.20090126.orig.tar.gz
 00f0e5c37bbb77743483d10d8e180dd0955463a6 6517 biojava-live_1.6.1.svn.20090126-1.diff.gz
 128d57744361bdc02d8f1bde6c24fd1921db0c5c 3209324 libbiojava1.6-java_1.6.1.svn.20090126-1_all.deb
 e9880e460ffb7f5737fede0d48e292a89fd50a62 49448 libbiojava-java_1.6.1.svn.20090126-1_all.deb
 5a41074e3472bb68b3f16241be4da27aa95e46ab 3553988 libbiojava-java-demos_1.6.1.svn.20090126-1_all.deb
 3ef1c1a2d722617ab58c38ac003731814cf31bda 4667588 libbiojava-java-doc_1.6.1.svn.20090126-1_all.deb
Checksums-Sha256: 
 94b13a7b2cbb6ffb28799bd230254bbf0e5ed27ad37103b984a426508e93cd0d 1619 biojava-live_1.6.1.svn.20090126-1.dsc
 58e6d22533c4da8ae68e25a061798c05676f46797b0bc57c973976540126b855 9410533 biojava-live_1.6.1.svn.20090126.orig.tar.gz
 7058f66bd955a5b4cbeeb84f061e8a44de27cc249a9561ed1ea4dbd7799c091f 6517 biojava-live_1.6.1.svn.20090126-1.diff.gz
 da2df58cf6dda82c7238348c9d3fde53ed561da6749769767d4b0e1f1921597d 3209324 libbiojava1.6-java_1.6.1.svn.20090126-1_all.deb
 961b4d69b5c36afa06d5961bd4d189ec678a47a6a47df35352bcdf9e15cefc44 49448 libbiojava-java_1.6.1.svn.20090126-1_all.deb
 444410566a33aa299190bd448775cee4e983bed86ab8f97ca34e6018fbf01985 3553988 libbiojava-java-demos_1.6.1.svn.20090126-1_all.deb
 ba649f3febe198a52fbd1562f1718d458831d02a3261f1c9affc898641be5bce 4667588 libbiojava-java-doc_1.6.1.svn.20090126-1_all.deb
Files: 
 01f3ad816934c2b11f48a42752611a55 1619 contrib/science optional biojava-live_1.6.1.svn.20090126-1.dsc
 2477e8cf0dee4667d27deeb4deb7f159 9410533 contrib/science optional biojava-live_1.6.1.svn.20090126.orig.tar.gz
 5a9e353f1fd2f8a6bd78db3271433d53 6517 contrib/science optional biojava-live_1.6.1.svn.20090126-1.diff.gz
 290d90a18bc7e4ac8a94c222bde10a65 3209324 contrib/science optional libbiojava1.6-java_1.6.1.svn.20090126-1_all.deb
 9e447020300706edbe7d9d1edcc16a2f 49448 contrib/science optional libbiojava-java_1.6.1.svn.20090126-1_all.deb
 f4b268cd227bf04c58623e5d5cc898ed 3553988 contrib/science optional libbiojava-java-demos_1.6.1.svn.20090126-1_all.deb
 6880c5add7587bcda79fbf37ff6e68c9 4667588 doc optional libbiojava-java-doc_1.6.1.svn.20090126-1_all.deb

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