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Bug#459637: marked as done (ITP: mustang -- multiple structural alignment of proteins)

Your message dated Sat, 25 Oct 2008 07:29:31 +0000
with message-id <E1KtdaV-0001c2-8M@ries.debian.org>
and subject line Bug#459637: fixed in mustang 3.0-1
has caused the Debian Bug report #459637,
regarding ITP: mustang -- multiple structural alignment of proteins
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
459637: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=459637
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Morten Kjeldgaard <mok@bioxray.au.dk>


* Package name    : mustang
  Version         : 3.0
  Upstream Author : Arun S. Konagurthu <arun@bx.psu.edu>
* URL             : http://www.cs.mu.oz.au/~arun/mustang/
  License         : 3 clause BSD
  Programming Lang: C++
  Description     : multiple structural alignment of proteins
   Mustang is an algorithm for structural alignment of multiple
   protein structures. Given a set of PDB files, the program uses the 
   spatial information in the Calpha atoms of the set to produce a sequence 
   alignment. Based on a progressive pairwise heuristic the algorithm 
   then proceeds through a number of refinement passes. Mustang 
   reports the multiple sequence alignment and the corresponding 
   superposition of structures.

-- System Information:
Debian Release: lenny/sid
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: i386 (i686)

Kernel: Linux 2.6.22-3-686 (SMP w/2 CPU cores)
Locale: LANG=en_DK.UTF-8, LC_CTYPE=en_DK.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

--- End Message ---
--- Begin Message --- 
Source: mustang
Source-Version: 3.0-1

We believe that the bug you reported is fixed in the latest version of
mustang, which is due to be installed in the Debian FTP archive:

mustang-testdata_3.0-1_all.deb
  to pool/main/m/mustang/mustang-testdata_3.0-1_all.deb
mustang_3.0-1.diff.gz
  to pool/main/m/mustang/mustang_3.0-1.diff.gz
mustang_3.0-1.dsc
  to pool/main/m/mustang/mustang_3.0-1.dsc
mustang_3.0-1_amd64.deb
  to pool/main/m/mustang/mustang_3.0-1_amd64.deb
mustang_3.0.orig.tar.gz
  to pool/main/m/mustang/mustang_3.0.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 459637@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Morten Kjeldgaard <mok@bioxray.au.dk> (supplier of updated mustang package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Mon, 04 Aug 2008 10:42:14 +0200
Source: mustang
Binary: mustang mustang-testdata
Architecture: source amd64 all
Version: 3.0-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Morten Kjeldgaard <mok@bioxray.au.dk>
Description: 
 mustang    - multiple structural alignment of proteins
 mustang-testdata - multiple structural alignment of proteins, test data
Closes: 459637
Changes: 
 mustang (3.0-1) unstable; urgency=low
 .
   [ Nelson A. de Oliveira ]
   * debian/rules: CFLAGS -> CPPFLAGS
   * debian/control: add ${misc:Depends} to binary package, and
     add Suggests: mustang-testdata
   * Add debian/watch
 .
   [ Morten Kjeldgaard ]
   * Upload mustang to Debian  (Closes: #459637).
   * debian/control: Maintainer and homepage fields set as per
     Debian policy.
   * Include test pdb files in a separate package.
   * debian/rules: add get-orig-source target.
   * Include new upstream patches.
   * Upstream now distributes manpage which is installed.
   * Include pdb files from upstream tarball in a separate package,
     for a more extensive test.
 .
   [ Andreas Tille ]
   * Maintainer: Debian-Med Packaging Team
     Uploaders: Morten Kjeldgaard <mok@bioxray.au.dk>
   * XS-DM-Upload-Allowed: Yes
   * Vcs-Browser, Vcs-Svn
 .
   [ Steffen Moeller ]
   * Policy 3.8.0
   * Patch for gcc-4.3
   * debian/control has less redundany and easier working, added ref to paper.
   * changed debian watch to reflect version mangling in debian/changelog
Checksums-Sha1: 
 70b28e051074a5d095fa07cdb0a93f10c0abac65 1279 mustang_3.0-1.dsc
 d6e34ecc3094ec1f2c1dbce703a572bf75f406dc 164752 mustang_3.0.orig.tar.gz
 3f8e3a573c83fe13d62e9d280471bf8d7c874d56 6308 mustang_3.0-1.diff.gz
 8377b278d0870247018d41a3217d224c3433e4c1 82242 mustang_3.0-1_amd64.deb
 31e8286c8f9e687244d7827abed78207e708890e 85200 mustang-testdata_3.0-1_all.deb
Checksums-Sha256: 
 2aaf8e2840d36d945610baa9b6d055ec6b1e6c47649d34398fe5811f529086dd 1279 mustang_3.0-1.dsc
 6d35597930c456d03bb05d644408fd00b1e060d9c8f83353f33b06a42654f552 164752 mustang_3.0.orig.tar.gz
 cf97f6fa99097bf28ca678cbb9d74411f4141b039001bc86ce25825733f97ec0 6308 mustang_3.0-1.diff.gz
 6dfa875f5f509ff6a769346a2d469ae6c44e58590ae9cbaafd494d12f09a9c5f 82242 mustang_3.0-1_amd64.deb
 2a783ed5607c52a93ebdf4ad5913ad91ae42d31cb0ee2658f16d762330b6dc29 85200 mustang-testdata_3.0-1_all.deb
Files: 
 e109fccddc07b88d59df45cc2b566eaf 1279 science optional mustang_3.0-1.dsc
 883bd27b7ce9681476008089e769aa50 164752 science optional mustang_3.0.orig.tar.gz
 56a398b89e196b265a311a7479d0d4d1 6308 science optional mustang_3.0-1.diff.gz
 54de0d3bb08e0c373656758001e42408 82242 science optional mustang_3.0-1_amd64.deb
 92131037248fa1666a0cb1570e1a4c7d 85200 science optional mustang-testdata_3.0-1_all.deb

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--- End Message ---
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