Bug#491714: marked as done (ITP: libtfbs-perl -- module to scan DNA sequences with a position weight matrix)
Your message dated Wed, 30 Jul 2008 17:54:39 +0000
with message-id <E1KOFsl-0005rn-Fv@ries.debian.org>
and subject line Bug#491714: fixed in libtfbs-perl 0.5.svn.20080722-1
has caused the Debian Bug report #491714,
regarding ITP: libtfbs-perl -- module to scan DNA sequences with a position weight matrix
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
491714: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=491714
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>
* Package name : libtfbs-perl
Version : 0.5
* URL : http://tfbs.genereg.net/
* License : GPL, Artistic
Programming Lang: C, Perl
Description : module to scan DNA sequences with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
--- End Message ---
--- Begin Message ---
Source: libtfbs-perl
Source-Version: 0.5.svn.20080722-1
We believe that the bug you reported is fixed in the latest version of
libtfbs-perl, which is due to be installed in the Debian FTP archive:
libtfbs-perl_0.5.svn.20080722-1.diff.gz
to pool/main/libt/libtfbs-perl/libtfbs-perl_0.5.svn.20080722-1.diff.gz
libtfbs-perl_0.5.svn.20080722-1.dsc
to pool/main/libt/libtfbs-perl/libtfbs-perl_0.5.svn.20080722-1.dsc
libtfbs-perl_0.5.svn.20080722-1_i386.deb
to pool/main/libt/libtfbs-perl/libtfbs-perl_0.5.svn.20080722-1_i386.deb
libtfbs-perl_0.5.svn.20080722.orig.tar.gz
to pool/main/libt/libtfbs-perl/libtfbs-perl_0.5.svn.20080722.orig.tar.gz
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 491714@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated libtfbs-perl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 22 Jul 2008 00:07:17 +0200
Source: libtfbs-perl
Binary: libtfbs-perl
Architecture: source i386
Version: 0.5.svn.20080722-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
libtfbs-perl - scanning DNA sequence with a position weight matrix
Closes: 491714
Changes:
libtfbs-perl (0.5.svn.20080722-1) unstable; urgency=low
.
* Initial release (closes: #491714).
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