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Bug#420734: marked as done (ITP: propka -- Modifies the protonation state of protein structures)

Your message dated Thu, 24 Apr 2008 11:59:41 -0600
with message-id <E1Jp5jR-0006B8-RB@merkel.debian.org>
and subject line WNPP bug closing
has caused the Debian Bug report #420734,
regarding ITP: propka -- Modifies the protonation state of protein structures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
420734: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=420734
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz <debian@pinguinkiste.de>


* Package name    : propka
  Version         : 1.0.0
  Upstream Author : Jan Jensen <jhjensen@theory.ki.ku.dk>
* URL             : http://propka.ki.ku.dk/
* License         : GPL
  Programming Lang: Fortran
  Description     : Modifies the protonation state of protein structures

  PropKa is a tool to modify the protonation state of a protein 
  structure in the Protein Data Bank (PDB) format to match a given pKa
  value.
  .
  It can also be used to refine NMR structures, which often yield 
  inaccurate pKa values for some residues.
  .
  The PROPKA method is described in Hui Li, Andrew D. Robertson, and
  Jan H. Jensen "Very Fast Empirical Prediction and Interpretation of 
  Protein pKa Values" Proteins, 2005, 61, 704-721

Note: The program is currently only distributed by the author on 
request, since noone ever packaged it in a distributable form. I'm 
working on that with upstream, so a tarball is hopefully available soon.


-- System Information:
Debian Release: 4.0
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: amd64 (x86_64)
Shell:  /bin/sh linked to /bin/bash
Kernel: Linux 2.6.18-4-amd64
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)

Attachment: signature.asc
Description: Dies ist ein digital signierter Nachrichtenteil


--- End Message ---
--- Begin Message --- 
Hello,

This is an automatic mail sent to close the ITP you have reported or 
are involved with.

Your ITP wnpp bug is being closed because of the following reasons:
- It is, as of today, older than 365 days.
- It hasn't had any activity recently.

As this is an automatic procedure, it could of course have something
wrong and probably it would be closing some bugs that are not 
intended by owners and submitters (like you) to be closed, for
example if the ITP is still of your interest, or there has been 
some kind of activity around it. In that case, please reopen the
bug, do it, DO IT NOW! (I don't want to be blamed because of
mass closing and not let people know that they can easily reopen
their bugs ;-).

To re-open it, you simply have to mail control@bugs.debian.org
with a body text like this:

 reopen 420734
 stop

Further comments on the work done in the bug sent to
420734@bugs.debian.org would be truly welcomed.
Anyway, if you have any kind of problems when dealing with
the BTS, feel free to contact me and I'd be more than happy to help
you on this: <damog@debian.org>.

A similar process is being applied to other kind of wnpp bugs.

Thanks for your cooperation,

 -- David Moreno Garza <damog@debian.org>.

--- End Message ---
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