Bug#452373: ITP: glam2 -- Gapped Local Alignment of Motifs

[Charles Plessy <charles-debian-nospam@plessy.org>]

Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

  Package name    : glam2
  Version         : 1023 
  Upstream Authors: Martin C Frith <martin@cbrc.jp>
                    Timothy L Bailey <t.bailey@imb.uq.edu.au>
  URL             : http://bioinformatics.org.au/glam2
  License         : Public domain
  Programming Lang: C
  Description     : Gapped Local Alignment of Motifs

 GLAM2 is a software package for finding motifs in sequences, typically
 amino-acid or nucleotide sequences. A motif is a re-occurring sequence
 pattern: typical examples are the TATA box and the CAAX prenylation
 motif. The main innovation of GLAM2 is that it allows insertions and
 deletions in motifs.

Packaging was started by Steffen Möller, and is almost finished. There
is a PDF file with no sources, but this time one of the authors is a
friend, so getting them will be piece of cake.

-- 
Charles Plessy
Debian-Med packaging team
Wakō, Saitama, Japan