Bug#442135: ITP: libbio-asn1-entrezgene-perl -- parser for NCBI Entrez Gene
Package: wnpp
Severity: wishlist
Owner: David Paleino <d.paleino@gmail.com>
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* Package name : libbio-asn1-entrezgene-perl
Version : 1.091
Upstream Author : Dr. Mingyi Liu <mingyi.liu@gpc-biotech.com>
* URL : http://search.cpan.org/dist/Bio-ASN1-EntrezGene/
* License : Perl-like (GNU GPL - Artistic)
Programming Lang: Perl
Description : parser for NCBI Entrez Gene
This source packages generates:
libbio-asn1-entrezgene-perl - parser for NCBI Entrez Gene
Bio::ASN1::EntrezGene is a regular expression-based parser for NCBI Entrez
Gene genome databases (<http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene>).
It parses an ASN.1-formatted Entrez Gene record and returns a data structure
that contains all data items from the gene record.
.
The parser will report error & line number if input data does not conform to
the NCBI Entrez Gene genome annotation file format.
libbio-asn1-sequence-perl - parser for ASN.1-formatted NCBI Sequences
Bio::ASN1::Sequence is a regular expression-based Perl Parser for
ASN.1-formatted NCBI sequences. It parses an ASN.1-formatted sequence record
and returns a data structure that contains all data items from the sequence
record.
.
The parser will report error & line number if input data does not conform to
the NCBI Sequence annotation file format.
.
The sequence parser is basically a modified version of the high-performance
Bio::ASN1::EntrezGene parser. However this standalone module exists since it
is more efficient to keep Sequence-specific code out of EntrezGene.pm.
- -- System Information:
Debian Release: unstable/experimental
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: i386 (i686)
Kernel: Linux 2.6.20 (SMP w/2 CPU cores)
Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash
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