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Bug#409640: marked as done (ITP: mafft -- Multiple alignment program for amino acid or nucleotide sequences [med-bio])



Your message dated Sun, 19 Aug 2007 15:14:07 +0000
with message-id <E1IMmTf-0008Io-8O@ries.debian.org>
and subject line Bug#409640: fixed in mafft 6.240-1
has caused the attached Bug report to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what I am
talking about this indicates a serious mail system misconfiguration
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Debian bug tracking system administrator
(administrator, Debian Bugs database)

--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

  Package name    : mafft
  Version         : 6.236
  Upstream Author : Kazutaka Katoh <katoh@bioreg.kyushu-u.ac.jp>
  URL             : http://align.bmr.kyushu-u.ac.jp/mafft/software/
  License         : BSD
  Programming Lang: C
  Description     : Multiple alignment program for amino acid or nucleotide sequences

MAFFT is a multiple sequence alignment program for unix-like operating
systems.  It offers a range of multiple alignment methods, L-INS-i
(accurate; recommended for <200 sequences), FFT-NS-2 (fast; recommended
for >2,000 sequences), etc.

MAFFT was non-free, but Version 6.233 and later are distributed under
the BSD license.

-- System Information:
Debian Release: 4.0
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: powerpc (ppc64)
Shell:  /bin/sh linked to /bin/bash
Kernel: Linux 2.6.18-2-powerpc64
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)


--- End Message ---
--- Begin Message ---
Source: mafft
Source-Version: 6.240-1

We believe that the bug you reported is fixed in the latest version of
mafft, which is due to be installed in the Debian FTP archive:

mafft_6.240-1.diff.gz
  to pool/main/m/mafft/mafft_6.240-1.diff.gz
mafft_6.240-1.dsc
  to pool/main/m/mafft/mafft_6.240-1.dsc
mafft_6.240-1_i386.deb
  to pool/main/m/mafft/mafft_6.240-1_i386.deb
mafft_6.240.orig.tar.gz
  to pool/main/m/mafft/mafft_6.240.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 409640@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Charles Plessy <charles-debian-nospam@plessy.org> (supplier of updated mafft package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.7
Date: Sat,  9 Jun 2007 12:06:43 +0900
Source: mafft
Binary: mafft
Architecture: source i386
Version: 6.240-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <charles-debian-nospam@plessy.org>
Description: 
 mafft      - Multiple alignment program for amino acid or nucleotide sequences
Closes: 409640
Changes: 
 mafft (6.240-1) unstable; urgency=low
 .
   * Initial release (Closes: #409640)
Files: 
 5a956a475ba0ebf13e0af514d92c58bc 1122 science optional mafft_6.240-1.dsc
 e603c1dbef35913d46286d5b98b601a3 657197 science optional mafft_6.240.orig.tar.gz
 82e8d9a84040a2c17b45369fe2f90c39 6599 science optional mafft_6.240-1.diff.gz
 64b1c377e4252bc7579232584b267f46 1695018 science optional mafft_6.240-1_i386.deb

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