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Bug#408347: marked as done (ITP: proda -- multiple alignment of protein sequences with repeated and shuffled elements)

Your message dated Mon, 07 May 2007 15:11:53 +0000
with message-id <E1Hl4sT-0007eL-Pk@ries.debian.org>
and subject line Bug#408347: fixed in proda 1.0-1
has caused the attached Bug report to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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Debian bug tracking system administrator
(administrator, Debian Bugs database)
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

  Package name    : proda
  Version         : 1.0
  Upstream Author : Tu Minh Phuong, Chuong Do, Robert Edgar, and Serafim Batzoglou
  URL             : http://proda.stanford.edu/
  License         : Public domain
  Description     : multiple alignment of protein sequences with repeated and shuffled elements

 ProDA is a system for automated detection and alignment of homologous
 regions in collections of proteins with arbitrary domain architectures.
 Given an input set of unaligned sequences, ProDA identifies all
 homologous regions appearing in one or more sequences, and returns a
 collection of local multiple alignments for these regions.
 .
 ProDA is published in: Phuong T.M., Do C.B., Edgar R.C., and Batzoglou
 S. Multiple alignment of protein sequences with repeats and
 rearrangements. Nucleic Acids Research 2006 34(20), 5932-5942.
 .
  Homepage: http://proda.stanford.edu/

-- System Information:
Debian Release: 3.1
Architecture: i386 (i686)
Kernel: Linux 2.6.16-2-486
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)

--- End Message ---
--- Begin Message --- 
Source: proda
Source-Version: 1.0-1

We believe that the bug you reported is fixed in the latest version of
proda, which is due to be installed in the Debian FTP archive:

proda_1.0-1.diff.gz
  to pool/main/p/proda/proda_1.0-1.diff.gz
proda_1.0-1.dsc
  to pool/main/p/proda/proda_1.0-1.dsc
proda_1.0-1_i386.deb
  to pool/main/p/proda/proda_1.0-1_i386.deb
proda_1.0.orig.tar.gz
  to pool/main/p/proda/proda_1.0.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 408347@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
David Paleino <d.paleino@gmail.com> (supplier of updated proda package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.7
Date: Tue, 24 Apr 2007 12:47:45 +0200
Source: proda
Binary: proda
Architecture: source i386
Version: 1.0-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: David Paleino <d.paleino@gmail.com>
Description: 
 proda      - multiple alignment of protein sequences
Closes: 408347
Changes: 
 proda (1.0-1) unstable; urgency=low
 .
   * Initial release (Closes: #408347)
Files: 
 4272118486a4a4433f764c92f9d81c95 809 science optional proda_1.0-1.dsc
 99a0c04983d043f70e74b33ba6f38018 38868 science optional proda_1.0.orig.tar.gz
 dd5ef56f6252fd287cba6b00fff68059 4543 science optional proda_1.0-1.diff.gz
 41cdd9b9e43c9aaffbdabc36f9125a48 56446 science optional proda_1.0-1_i386.deb

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--- End Message ---
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