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Bug#365499: marked as done (ITP: probcons -- PROBabilistic CONSistency-based multiple sequence alignment)

Your message dated Mon, 26 Jun 2006 10:50:59 -0700
with message-id <E1FuvEh-0006S8-Lg@spohr.debian.org>
and subject line Bug#365499: fixed in probcons 1.10-1
has caused the attached Bug report to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what I am
talking about this indicates a serious mail system misconfiguration
somewhere.  Please contact me immediately.)

Debian bug tracking system administrator
(administrator, Debian Bugs database)
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

  Package name    : probcons
  Version         : 1.10
  Upstream Author : Chuong B. Do <chuongdo@cs.stanford.edu>
  URL             : http://probcons.stanford.edu/download.html
  License         : Public Domain
  Description     : PROBabilistic CONSistency-based multiple sequence alignment

 PROBCONS is a tool for generating multiple alignments of protein
 sequences. Using a combination of probabilistic modeling and
 consistency-based alignment techniques, PROBCONS has achieved the
 highest accuracies of all alignment methods to date. On the BAliBASE
 benchmark alignment database, alignments produced by PROBCONS show
 statistically significant improvement over current programs, containing
 an average of 7% more correctly aligned columns than those of T-Coffee,
 11% more correctly aligned columns than those of CLUSTAL W, and 14%
 more correctly aligned columns than those of DIALIGN. Probcons is
 published in  Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and
 Batzoglou, S. 2005.  Genome Research 15: 330-340.
 .
 Homepage: http://probcons.stanford.edu/
 
-- System Information:
Debian Release: testing/unstable
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: powerpc (ppc64)
Shell:  /bin/sh linked to /bin/bash
Kernel: Linux 2.6.16farm
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)

--- End Message ---
--- Begin Message --- 
Source: probcons
Source-Version: 1.10-1

We believe that the bug you reported is fixed in the latest version of
probcons, which is due to be installed in the Debian FTP archive:

probcons-extra_1.10-1_i386.deb
  to pool/main/p/probcons/probcons-extra_1.10-1_i386.deb
probcons_1.10-1.diff.gz
  to pool/main/p/probcons/probcons_1.10-1.diff.gz
probcons_1.10-1.dsc
  to pool/main/p/probcons/probcons_1.10-1.dsc
probcons_1.10-1_i386.deb
  to pool/main/p/probcons/probcons_1.10-1_i386.deb
probcons_1.10.orig.tar.gz
  to pool/main/p/probcons/probcons_1.10.orig.tar.gz



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 365499@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Charles Plessy <charles-debian-nospam@plessy.org> (supplier of updated probcons package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.7
Date: Wed,  3 May 2006 09:20:57 +0900
Source: probcons
Binary: probcons-extra probcons
Architecture: source i386
Version: 1.10-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <charles-debian-nospam@plessy.org>
Description: 
 probcons   - PROBabilistic CONSistency-based multiple sequence alignment
 probcons-extra - Extra programs from the probcons package
Closes: 365499
Changes: 
 probcons (1.10-1) unstable; urgency=low
 .
   * Initial release Closes: #365499
Files: 
 69961e8bb181665f758c73bb0e3cd0f5 718 science optional probcons_1.10-1.dsc
 c7938b95732a85c35225bafd4b5b174f 43004 science optional probcons_1.10.orig.tar.gz
 a25ebb6285ade4a0645c2f1ec149ec2d 17543 science optional probcons_1.10-1.diff.gz
 bf95e3d9e3a5105feb11a40e9080b636 155782 science optional probcons_1.10-1_i386.deb
 b4747d4e7325a6657cbe3fdd9aff8e37 48398 science optional probcons-extra_1.10-1_i386.deb

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--- End Message ---
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