Bug#310934: ITP: rnamotif -- RNA search for secondary structure motifs
Package: wnpp
Owner: Adrian Mastronardi <amastronardi@gmail.com>
Severity: wishlis
Package name : rnamotif
Version : 3.0.4
URL : http://www.scripps.edu/mb/case/
License : gpl
Description : RNA search for secondary structure motifs
The rnamotif program searches a database for RNA sequences that
match a "motif" describing secondary structure interactions.
A match means that the given sequence is capable of adopting the
given secondary structure, but is not intended to be predictive.
Matches can be ranked by applying scoring rules that may provide
finer distinctions than just matching to a profile. The rnamotif
program is a (significant) extension of earlier programs rnamot
and rnabob. The nearest-neighbor energies used in the scoring
section are based on Turner's rules.
-- System Information:
Debian Release: 3.1
Architecture: amd64 (x86_64)
Shell: /bin/sh linked to /bin/bash
Kernel: Linux 2.6.11.9
Locale: LANG=en_GB, LC_CTYPE=en_GB (charmap=ISO-8859-1)
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