Gunther,
sim. Mas este é um problema que não consigo detectar. Este é um pacote
para o sistema estatístico R, já tentei instalar na mão mesmo, mas dá o
mesmo erro. Este erro acontece com vários pacotes. Tentei instalar via
o src do debian para ver se tinha alguma dependência quebrada no
sistema, mas não tinha e assim mesmo não funcionou.
Vejam como foi instalando um pacote manualmente no R.
[root@amandix Downloads]# R CMD build --binary vegan
* checking for file 'vegan/DESCRIPTION' ... OK
* preparing 'vegan':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
* installing *source* package 'vegan' ...
** libs
make: *** No rule to make target `cepin.o', needed by `vegan.so'. Stop.
*** arch - Rgnome
Warning in file(con, "r") :
cannot open file '/usr/lib/R/etc/Rgnome/Makeconf': No such file or
directory
Error in file(con, "r") : cannot open the connection
* removing '/tmp/RtmpPKDzIj/Rinst350544c5/vegan'
ERROR
Installation failed
Veja o mesmo em meu outro computador, o estranho que no meu depois do
libs, vem o gfortran e da certo, no que não funciona está chamando o
make, mas porque isto e como corrigir.
[ronaldo@PPGCBix Downloads]$ R CMD build --binary vegan
* checking for file ‘vegan/DESCRIPTION’ ... OK
* preparing ‘vegan’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
* installing *source* package ‘vegan’ ...
** libs
gfortran -fpic -O3 -pipe -g -c cepin.f -o cepin.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
data2hill.c -o data2hill.o
gfortran -fpic -O3 -pipe -g -c decorana.f -o decorana.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
goffactor.c -o goffactor.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
nestedness.c -o nestedness.o
gfortran -fpic -O3 -pipe -g -c ordering.f -o ordering.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
pnpoly.c -o pnpoly.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
stepacross.c -o stepacross.o
gcc -I/usr/share/R/include -fpic -std=gnu99 -O3 -pipe -g -c
vegdist.c -o vegdist.o
gcc -shared -o vegan.so cepin.o data2hill.o decorana.o goffactor.o
nestedness.o ordering.o pnpoly.o stepacross.o vegdist.o -lgfortran -lm
-L/usr/lib/R/lib -lR
installing to /tmp/Rtmpo6i5t3/Rinst3509a8de/vegan/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
packaged installation of ‘vegan’ as
‘vegan_1.17-8_R_i486-pc-linux-gnu.tar.gz’
* DONE (vegan)
Em 09-03-2011 13:11, Gunther Furtado escreveu:
Olá,
Em 9 de março de 2011 12:48, Ronaldo Reis Junior <chrysopa@gmail.com> escreveu:
Pessoal,
estou tentando compilar dos fontes um pacote do debian mas está dando erro
que não encontro. Ele fica falando de um tal de Rgnome, mas em outro
computador este arquivo/diretório não existe e tudo funciona normal. Será
que alguem saberia onde procurar o problema?
As duas máquinas usam o repositório unstable como padrão?
Valeu
Ronaldo
[root@amandix ~]# apt-get build-dep r-cran-mapproj
Reading package lists... Done
Building dependency tree
Reading state information... Done
0 upgraded, 0 newly installed, 0 to remove and 23 not upgraded.
[root@amandix ~]# apt-get source r-cran-mapproj -b
Reading package lists... Done
Building dependency tree
Reading state information... Done
Need to get 31.5 kB of source archives.
Get:1 http://http.us.debian.org/debian/ unstable/main r-cran-mapproj
1.1-8.3-1 (dsc) [1069 B]
Get:2 http://http.us.debian.org/debian/ unstable/main r-cran-mapproj
1.1-8.3-1 (tar) [24.0 kB]
Get:3 http://http.us.debian.org/debian/ unstable/main r-cran-mapproj
1.1-8.3-1 (diff) [6455 B]
Fetched 31.5 kB in 1s (24.4 kB/s)
dpkg-source: info: extracting r-cran-mapproj in r-cran-mapproj-1.1-8.3
dpkg-source: info: unpacking r-cran-mapproj_1.1-8.3.orig.tar.gz
dpkg-source: info: applying r-cran-mapproj_1.1-8.3-1.diff.gz
dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g
-O2
dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g
-O2
dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g
-O2
dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package r-cran-mapproj
dpkg-buildpackage: source version 1.1-8.3-1
dpkg-buildpackage: source changed by Chris Lawrence <lawrencc@debian.org>
dpkg-buildpackage: host architecture i386
dpkg-source --before-build r-cran-mapproj-1.1-8.3
debian/rules clean
test -x debian/rules
dh_testroot
dh_clean
debian/rules build
test -x debian/rules
mkdir -p "."
debian/rules binary
test -x debian/rules
dh_testroot
dh_prep
dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
R CMD INSTALL -l
/root/r-cran-mapproj-1.1-8.3/debian/r-cran-mapproj/usr/lib/R/site-library
--clean .
* installing *source* package 'mapproj' ...
** libs
make[1]: Entering directory `/root/r-cran-mapproj-1.1-8.3'
make[1]: *** No rule to make target `aitoff.o', needed by `mapproj.so'.
Stop.
make[1]: Leaving directory `/root/r-cran-mapproj-1.1-8.3'
make[1]: Entering directory `/root/r-cran-mapproj-1.1-8.3'
make[1]: Leaving directory `/root/r-cran-mapproj-1.1-8.3'
*** arch - Rgnome
Warning in file(con, "r") :
cannot open file '/usr/lib/R/etc/Rgnome/Makeconf': No such file or
directory
Error in file(con, "r") : cannot open the connection
* removing
'/root/r-cran-mapproj-1.1-8.3/debian/r-cran-mapproj/usr/lib/R/site-library/mapproj'
make: *** [R_any_arch] Error 1
dpkg-buildpackage: error: debian/rules binary gave error exit status 2
Build command 'cd r-cran-mapproj-1.1-8.3 && dpkg-buildpackage -b -uc'
failed.
E: Child process failed
--
2ª lei - Na pesquisa, o que importa é o que está correto,
e não quem está correto.
--Herman, I. P. 2007. Following the law. NATURE, Vol 445, p. 228.
Prof. Ronaldo Reis Júnior
| .''`. UNIMONTES/DBG/Lab. Ecologia Comportamental e Computacional
| : :' : Campus Universitário Prof. Darcy Ribeiro, Vila Mauricéia
| `. `'` CP: 126, CEP: 39401-089, Montes Claros - MG - Brasil
| `- Fone: (38) 3229-8192 | ronaldo.reis@unimontes.br
| http://www.ppgcb.unimontes.br/lecc | LinuxUser#: 205366
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--
2ª lei - Na pesquisa, o que importa é o que está correto,
e não quem está correto.
--Herman, I. P. 2007. Following the law. NATURE, Vol 445, p. 228.
> Prof. Ronaldo Reis Júnior
| .''`. UNIMONTES/DBG/Lab. Ecologia Comportamental e Computacional
| : :' : Campus Universitário Prof. Darcy Ribeiro, Vila Mauricéia
| `. `'` CP: 126, CEP: 39401-089, Montes Claros - MG - Brasil
| `- Fone: (38) 3229-8192 | ronaldo.reis@unimontes.br
| http://www.ppgcb.unimontes.br/lecc | LinuxUser#: 205366
|