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Bug#776192: Bug: upgrade-reports wheezy to jessie boot problem



Package: upgrade-reports
Version: wheezy to jessie

Problem Description:

I have been attempting to upgrade a Dell 1950 to jessie.  I start with a fresh install of 
wheezy and do a dist-upgrade to jessie.  The upgrade proceeds fine, but on reboot the 
system is dropped into initramfs.  When I look around I see that no disks devices are 
visible.  I am able to reboot the system using the wheezy kernel and I have tried adding 
rootdelay=120 as a boot option to no avail.

 
After the upgrade I am able to boot using the wheezy kernel.

Hardware: Dell 1950
          32 GB memory
          2 SAS disks configured as a hardware RAID1 device
          2 QLogic HBAs

The boot messages show that neither the QLogic or the PERC disk control are found.  

I am not seeing the same problem on an r620 with Emulex HBAs.

Here is a screen capture of the failing boot.

fssvr32:/etc/default# reboot
INIT: Switching[info] Using makefi[ 1618.547571] afs: WARM le-style concurrshutting down of: vcaches... ent boot in runlCB... evel 6.
[ ok RxEvent... opping interneBkG... t superserver: xCTrunc... inetdAFSDB... .
[ ok ] Stopping deferred execution scheduler: atd.
[ ok ] Stopping SMP IRQ Balancer: irqbalance.
UnmaskRxkSignals... RxListener...  ALL allocated tables... done
Stopping AFS services: afsd openafs.
[ ok ] Asking all remaining processes to terminate...done.
[ ok ] All processes ended within 2 seconds...done.
[ ok ] Stopping enhanced syslogd: rsyslogd.
[info] Saving the system clock.
[info] Hardware Clock updated to Sat Jan 24 20:15:42 PST 2015.
[....] Deconfiguring network interfaces...postconf: fatal: open /etc/postfix/main.cf: No such file or directory
postconf: fatal: open /etc/postfix/main.cf: No such file or directory
done.

... BIOS displays ...

Loading Linuxo3.16.0-4-amd64 ...
Loading initial ramdisk ...
[    0.000000] Initializing cgroup subsys cpuset
[    0.000000] Initializing cgroup subsys cpu
[    0.000000] Initializing cgroup subsys cpuacct
[    0.000000] Linux version 3.16.0-4-amd64 (debian-kernel@lists.debian.org) (gcc version 4.8.3 (Debian 4.8.3-16) ) #1 SMP Debian 3.16.7-ckt2-1 (2014-12-08)
[    0.000000] Command line: BOOT_IMAGE=/boot/vmlinuz-3.16.0-4-amd64 root=UUID=39c20811-40cb-4c49-8b23-a25bb15208c0 ro console=tty0 console=ttyS0,9600n8 rootdelay=120
[    0.000000] e820: BIOS-provided physical RAM map:
    0.000000] BIOS-e820: [mem 0x0000000000100000-0x000000007fb4ffff] usable
[    0.000000] BIOS-e820: [mem 0x000000007fb50000-0x000000007fb65fff] reserved
[    0.000000] BIOS-e820: [mem 0x000000007fb66000-0x000000007fb85bff] ACPI data
[    0.000000] BIOS-e820: [mem 0x000000007fb85c00-0x000000007fffffff] reserved
[    0.000000] BIOS-e820: [mem 0x00000000e0000000-0x00000000efffffff] reserved
[    0.000000] BIOS-e820: [mem 0x00000000fe000000-0x00000000ffffffff] reserved
[    0.000000] BIOS-e820: [mem 0x0000000100000000-0x000000087fffffff] usable
[    0.000000] NX (Execute Disable) protection: active
[    0.000000] SMBIOS 2.5 present.    e   v   .  i    -   e
[    0.000000] AGP: No AGP bridge found               67 GB
[    0.000000] e820: last_pfn = 0x880000 max_arch_pfn = 0x400000000
[    0.000000] x86 PAT enabled: cpu 0, old 0x7040600070406, new 0x7010600070106
[    0.000000] e820: last_pfn = 0x7fb50 max_arch_pfn = 0x400000000
[    0.000000] found SMP MP-table at [mem 0x000fe710-0x000fe71f] mapped at [ffff8800000fe710]
[    0.000000] init_memory_mapping: [mem 0x00000000-0x000fffff]
[    0.000000] init_memory_mapping: [mem 0x87fe00000-0x87fffffff]
[    0.000000] init_memory_mapping: [mem 0x87c000000-0x87fdfffff]
[    0.000000] init_memory_mapping: [mem 0x800000000-0x87bffffff]
[    0.000000] init_memory_mapping: [mem 0x00100000-0x7fb4ffff]
[    0.000000] init_memory_mapping: [mem 0x100000000-0x7ffffffff]
[    0.000000] RAMDISK: [mem 0x35c28000-0x36e0bfff]00001)
[    0.000000] ACPI: MCFG 0x000000007FB831C0 00003C (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: WD__ 0x000000007FB83200 000134 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: SLIC 0x000000007FB83338 000024 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: ERST 0x000000007FB6AB18 000210 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: HEST 0x000000007FB6AD28 00027C (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: BERT 0x000000007FB6A998 000030 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: EINJ 0x000000007FB6A9C8 000150 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] ACPI: TCPA 0x000000007FB834BC 000064 (v01 DELL   PE_SC3   00000001 DELL 00000001)
[    0.000000] No NUMA configuration found
[    0.000000] Faking a node at [mem 0x0000000000000000-0x000000087fffffff]
[    0.000000] Initmem setup node 0 [mem 0x00000000-0x87fffffff]
[    0.000000]   NODE_DATA [mem 0x87ffde000-0x87ffe2fff]
[    0.000000] Zone ranges:
[    0.000000]   DMA      [mem 0x00001000-0x00ffffff]
[    0.000000]   DMA32    [mem 0x01000000-0xffffffff]
[    0.000000]   Normal   [mem 0x100000000-0x87fffffff]
[    0.000000] Movable zone start for each node
[    0.000000] Early memory node ranges
[    0.000000]   node   0: [mem 0x00001000-0x0009ffff]
[    0.000000]   node   0: [mem 0x00100000-0x7fb4ffff]
[    0.000000]   node   0: [mem 0x100000000-0x87fffffff]
[    0.000000] ACPI: PM-Timer IO Port: 0x808
[    0.000000] ACPI: LAPIC (acpi_id[0x01] lapic_id[0x00] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x02] lapic_id[0x04] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x03] lapic_id[0x02] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x04] lapic_id[0x06] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x05] lapic_id[0x01] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x06] lapic_id[0x05] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x07] lapic_id[0x03] enabled)
[    0.000000] ACPI: LAPIC (acpi_id[0x08] lapic_id[0x07] enabled)
[    0.000000] ACPI: LAPIC_NMI (acpi_id[0xff] high edge lint[0x1])
[    0.000000] ACPI: IOAPIC (id[0x08] address[0xfec00000] gsi_base[0])
[    0.000000] IOAPIC[0]: apic_id 8, version 32, address 0xfec00000, GSI 0-23
[    0.000000] ACPI: INT_SRC_OVR (bus 0 bus_irq 0 global_irq 2 dfl dfl)
[    0.000000] ACPI: INT_SRC_OVR (bus 0 bus_irq 9 global_irq 9 high level)    0.000000] smpboot: Allowing 8 CPUs, 0 hotplug CPUs
[    0.000000] PM: Registered nosave memory: [mem 0x000a0000-0x000fffff]
[    0.000000] PM: Registered nosave memory: [mem 0x7fb50000-0x7fb65fff]
[    0.000000] PM: Registered nosave memory: [mem 0x7fb66000-0x7fb84fff]
[    0.000000] PM: Registered nosave memory: [mem 0x7fb85000-0x7fb85fff]
[    0.000000] PM: Registered nosave memory: [mem 0x7fb86000-0x7fffffff]
[    0.000000] PM: Registered nosave memory: [mem 0x80000000-0xdfffffff]
[    0.000000] PM: Registered nosave memory: [mem 0xe0000000-0xefffffff]
[    0.000000] PM: Registered nosave memory: [mem 0xf0000000-0xfdffffff]
[    0.000000] PM: Registered nosave memory: [mem 0xfe000000-0xffffffff]
[    0.000000] e820: [mem 0x80000000-0xdfffffff] available for PCI devices
[    0.000000] Booting paravirtualized kernel on bare hardware
[    0.000000] setup_percpu: NR_CPUS:512 nr_cpumask_bits:512 nr_cpu_ids:8 nr_node_ids:1
[    0.000000] PERCPU: Embedded 27 pages/cpu @ffff88087fc00000 s81792 r8192 d20608 u262144
[    0.000000] Built 1 zonelists in Zone order, mobility grouping on.  Total pages: 8272616
[    0.000000] Policy zone: Normal
[    0.000000] Kernel command line: BOOT_IMAGE=/boot/vmlinuz-3.16.0-4-amd64 root=UUID=39c20811-40cb-4c49-8b23-a25bb15208c0 ro console=tty0 console=ttyS0,9600n8 rootdelay=120
[    0.000000] PID hash table entries: 4096 (order: 3, 32768 bytes)
[    0.000000] AGP: Checking aperture...
[    0.000000] AGP: No AGP bridge found[    0.000000] Hierarchical RCU implementation.
[    0.000000] 	    RCU dyntick-idle grace-period acceleration is enabled.
[    0.000000] 	    RCU restricting CPUs from NR_CPUS=512 to nr_cpu_ids=8.
[    0.000000] RCU: Adjusting geometry for rcu_fanout_leaf=16, nr_cpu_ids=8
[    0.000000] NR_IRQS:33024 nr_irqs:744 16
[    0.000000] Console: colour VGA+ 80x25
[    0.000000] console [tty0] enabled
[    0.000000] console [ttyS0] enabled
[    0.000000] tsc: Fast TSC calibration using PIT
[    0.000000] tsc: Detected 2327.564 MHz processor
[    0.008012] Calibrating delay loop (skipped), value calculated using timer frequency.. 4655.12 BogoMIPS (lpj=9310256)
[    0.016002] pid_max: default: 32768 minimum: 301
[    0.020013] ACPI: Core revision 20140424
[    0.028596] ACPI: All ACPI Tables successfully acquired
[    0.040042] Security Framework initialized
[    0.044015] AppArmor: AppArmor disabled by boot time parameter
[    0.048002] Yama: disabled by default; enable with sysctl kernel.yama.*
[    0.057008] Dentry cache hash table entries: 4194304 (order: 13, 33554432 bytes)
[    0.075552] Inode-cache hash table entries: 2097152 (order: 12, 16777216 bytes)
[    0.085438] Mount-cache hash table entries: 65536 (order: 7, 524288 bytes)
[    0.088050] Mountpoint-cache hash table entries: 65536 (order: 7, 524288 bytes)
    0.096009] Initializing cgroup subsys devices
[    0.100012] Initializing cgroup subsys freezer
[    0.104005] Initializing cgroup subsys net_cls
[    0.108008] Initializing cgroup subsys blkio
[    0.112007] Initializing cgroup subsys perf_event
[    0.116004] Initializing cgroup subsys net_prio
[    0.120035] CPU: Physical Processor ID: 0
[    0.124002] CPU: Processor Core ID: 0
[    0.128003] mce: CPU supports 6 MCE banks
[    0.132010] CPU0: Thermal monitoring enabled (TM2)
[    0.136009] Last level iTLB entries: 4KB 128, 2MB 4, 4MB 4
[    0.136009] Last level dTLB entries: 4KB 256, 2MB 0, 4MB 32, 1GB 0
[    0.136009] tlb_flushall_shift: -1
[    0.140090] Freeing SMP alternatives memory: 20K (ffffffff81a19000 - ffffffff81a1e000)
[    0.145433] ftrace: allocating 21561 entries in 85 pages
[    0.156434] ..TIMER: vector=0x30 apic1=0 pin1=2 apic2=-1 pin2=-1
[    0.200057] smpboot: CPU0: Intel(R) Xeon(R) CPU           E5410  @ 2.33GHz (fam: 06, model: 17, stepping: 06)
[    0.220000] Performance Events: PEBS fmt0+, 4-deep LBR, Core2 events, Intel PMU driver.
[    0.236002] ... version:                2
[    0.240001] ... bit width:              40
[    0.244000] ... generic registers:      2
[    0.252001] ... max period:             000000007fffffff
[    0.256001] ... fixed-purpose events:   3
[    0.260001] ... event mask:             0000000700000003
[    0.269322] x86: Booting SMP configuration:
[    0.272002] .... node  #0, CPUs:      #1
[    0.376236] NMI watchdog: enabled on all CPUs, permanently consumes one hw-PMU counter.
[    0.380144]  #2 #3 #4 #5 #6 #7
[    0.480010] x86: Booted up 1 node, 8 CPUs
[    0.484002] smpboot: Total of 8 processors activated (37240.76 BogoMIPS)
[    0.492295] devtmpfs: initialized
[    0.508255] pinctrl core: initialized pinctrl subsystem
[    0.512144] NET: Registered protocol family 16
[    0.520149] cpuidle: using governor ladder
[    0.524003] cpuidle: using governor menu
[    0.532027] ACPI FADT declares the system doesn't support PCIe ASPM, so disable it
[    0.536002] ACPI: bus type PCI registered
[    0.540002] acpiphp: ACPI Hot Plug PCI Controller Driver version: 0.5
[    0.544193] PCI: MMCONFIG for domain 0000 [bus 00-ff] at [mem 0xe0000000-0xefffffff] (base 0xe0000000)
[    0.548003] PCI: MMCONFIG at [mem 0xe0000000-0xefffffff] reserved in E820
[    0.552450] PCI: Using configuration type 1 for base access
[    0.556002] PCI: Dell PowerEdge 1950 detected, enabling pci=bfsort.
    0.972002] ACPI Error: Method parse/execution failed [\_SB_._OSC] (Node ffff88087f037a18), AE_NOT_FOUND (20140424/psparse-536)
[    1.112140] ACPI: Interpreter enabled
[    1.156007] ACPI Exception: AE_NOT_FOUND, While evaluating Sleep State [\_S1_] (20140424/hwxface-580)
[    1.264002] ACPI Exception: AE_NOT_FOUND, While evaluating Sleep State [\_S2_] (20140424/hwxface-580)
[    1.376002] ACPI Exception: AE_NOT_FOUND, While evaluating Sleep State [\_S3_] (20140424/hwxface-580)
[    1.488010] ACPI: (supports S0 S4 S5)
[    1.532002] ACPI: Using IOAPIC for interrupt routing
[    1.588804] HEST: Table parsing has been initialized.
[    1.652005] PCI: Using host bridge windows from ACPI; if necessary, use "pci=nocrs" and report a bug
[    1.766132] ACPI: PCI Root Bridge [PCI0] (domain 0000 [bus 00-ff])
[    1.840018] acpi PNP0A08:00: _OSC: OS supports [ExtendedConfig ASPM ClockPM Segments MSI]
[    1.940128] acpi PNP0A08:00: PCIe AER handled by firmware
[    2.004242] acpi PNP0A08:00: _OSC: OS now controls [PCIeHotplug PME PCIeCapability]
[    2.008247] PCI host bridge to bus 0000:00
[    2.012004] pci_bus 0000:00: root bus resource [bus 00-ff]
[    2.016002] pci_bus 0000:00: root bus resource [io  0x0000-0x0cf7]
[    2.020002] pci_bus 0000:00: root bus resource [io  0x0d00-0xffff]
[    2.024002] pci_bus 0000:00: root bus resource [mem 0x000a0000-0x000bffff]
[    2.028007] pci_bus 0000:00: root bus resource [mem 0x80000000-0xfdffffff]
[    2.032002] pci_bus 0000:00: root bus resource [mem 0xfed40000-0xfed44fff]
[    2.041632] pci 0000:00:1f.1: legacy IDE quirk: reg 0x10: [io  0x01f0-0x01f7]
[    2.044002] pci 0000:00:1f.1: legacy IDE quirk: reg 0x14: [io  0x03f6]
[    2.048002] pci 0000:00:1f.1: legacy IDE quirk: reg 0x18: [io  0x0170-0x0177]
[    2.052002] pci 0000:00:1f.1: legacy IDE quirk: reg 0x1c: [io  0x0376]
[    2.068113] pci 0000:00:02.0: PCI bridge to [bus 04-09]
[    2.081653] pci 0000:04:00.0: PCI bridge to [bus 05-08]
[    2.089973] pci 0000:05:00.0: PCI bridge to [bus 06-07]
[    2.100504] pci 0000:06:00.0: PCI bridge to [bus 07]
[    2.109512] pci 0000:05:01.0: PCI bridge to [bus 08]
[    2.114713] pci 0000:04:00.3: PCI bridge to [bus 09]
[    2.124012] pci 0000:00:03.0: PCI bridge to [bus 01]
[    2.136013] pci 0000:00:04.0: PCI bridge to [bus 0a]
[    2.140052] pci 0000:00:05.0: PCI bridge to [bus 0b]
[    2.152013] pci 0000:00:06.0: PCI bridge to [bus 0c]
[    2.156053] pci 0000:00:07.0: PCI bridge to [bus 0d]
[    2.168013] pci 0000:00:1c.0: PCI bridge to [bus 02-03]
[    2.172314] pci 0000:02:00.0: PCI bridge to [bus 03]
[    2.176249] pci 0000:00:1e.0: PCI bridge to [bus 0e] (subtractive decode)
[    2.188851] ACPI: PCI Interrupt Link [LK00] (IRQs 3 4 5 *6 7 10 11 12)
[    2.219314] ACPI: PCI Interrupt Link [LK01] (IRQs 3 4 5 6 7 10 11 12) *0, disabled.
[    2.250216] ACPI: PCI Interrupt Link [LK02] (IRQs 3 4 5 6 7 10 11 12) *0, disabled.
[    2.284072] ACPI: PCI Interrupt Link [LK03] (IRQs 3 4 *5 6 7 10 11 12)
[    2.314217] ACPI: PCI Interrupt Link [LK04] (IRQs 3 4 5 6 7 *10 11 12)
[    2.340072] ACPI: PCI Interrupt Link [LK05] (IRQs 3 4 5 6 7 10 *11 12)
[    2.372077] ACPI: PCI Interrupt Link [LK06] (IRQs 3 4 5 6 7 10 11 12) *0, disabled.
[    2.408073] ACPI: PCI Interrupt Link [LK07] (IRQs 3 4 5 6 7 10 11 12) *0, disabled.
[    2.444060] ACPI: Enabled 1 GPEs in block 00 to 1F
[    2.448078] vgaarb: setting as boot device: PCI:0000:0e:0d.0
[    2.452000] vgaarb: device added: PCI:0000:0e:0d.0,decodes=io+mem,owns=io+mem,locks=none
[    2.612005] vgaarb: loaded
[    2.644002] vgaarb: bridge control possible 0000:0e:0d.0
[    2.708099] PCI: Using ACPI for IRQ routing
[    2.766445] HPET: 3 timers in total, 0 timers will be used for per-cpu timer
[    2.848005] hpet0: at MMIO 0xfed00000, IRQs 2, 8, 0
[    2.908001] hpet0: 3 comparators, 64-bit 14.318180 MHz counter
[    2.981010] Switched to clocksource hpet
[    3.035022] pnp: PnP ACPI init
[    3.071524] ACPI: bus type PNP registered
[    3.123017] system 00:05: [io  0x0800-0x087f] could not be reserved
[    3.197982] system 00:05: [io  0x0880-0x08bf] has been reserved
[    3.268786] system 00:05: [io  0x08c0-0x08df] has been reserved
[    3.339582] system 00:05: [io  0x08e0-0x08e3] has been reserved
[    3.410380] system 00:05: [io  0x0900] has been reserved
[    3.473897] system 00:05: [io  0x0c00-0x0c7f] has been reserved
[    3.544698] system 00:05: [io  0x0ca0-0x0ca7] has been reserved
[    3.615495] system 00:05: [io  0x0ca9-0x0cab] has been reserved
[    3.686295] system 00:05: [io  0x0cad-0x0caf] has been reserved
[    3.757187] system 00:06: [io  0x0ca8] has been reserved
[    3.820735] system 00:06: [io  0x0cac] has been reserved
[    3.885018] system 00:07: [mem 0xe0000000-0xefffffff] has been reserved
[    3.964314] pnp: PnP ACPI: found 8 devices
[    4.013272] ACPI: bus type PNP unregistered
[    4.071422] pci 0000:06:00.0: PCI bridge to [bus 07]
[    4.130877] pci 0000:06:00.0:   bridge window [mem 0xf4000000-0xf7ffffff]
[    4.212312] pci 0000:05:00.0: PCI bridge to [bus 06-07]
[    4.274834] pci 0000:05:00.0:   bridge window [mem 0xf4000000-0xf7ffffff]
[    4.356175] pci 0000:05:01.0: PCI bridge to [bus 08]
[    4.415721] pci 0000:04:00.0: PCI bridge to [bus 05-08]
[    4.478249] pci 0000:04:00.0:   bridge window [mem 0xf4000000-0xf7ffffff]
[    4.559594] pci 0000:04:00.3: PCI bridge to [bus 09]
[    4.619137] pci 0000:00:02.0: PCI bridge to [bus 04-09]
[    4.681619] pci 0000:00:02.0:   bridge window [mem 0xf2000000-0xf7ffffff]
[    4.762823] pci 0000:00:03.0: PCI bridge to [bus 01]
[    4.822181] pci 0000:00:03.0:   bridge window [io  0xe000-0xefff]
[    4.895063] pci 0000:00:03.0:   bridge window [mem 0xfc700000-0xfc9fffff]
[    4.976269] pci 0000:00:04.0: PCI bridge to [bus 0a]
[    5.035630] pci 0000:00:04.0:   bridge window [io  0xd000-0xdfff]
[    5.108516] pci 0000:00:04.0:   bridge window [mem 0xfc500000-0xfc6fffff]
[    5.189724] pci 0000:00:05.0: PCI bridge to [bus 0b]
[    5.249086] pci 0000:00:06.0: PCI bridge to [bus 0c]
[    5.308445] pci 0000:00:06.0:   bridge window [io  0xc000-0xcfff]
[    5.381327] pci 0000:00:06.0:   bridge window [mem 0xfc300000-0xfc4fffff]
[    5.462535] pci 0000:00:07.0: PCI bridge to [bus 0d]
[    5.521899] pci 0000:02:00.0: PCI bridge to [bus 03]
[    5.581260] pci 0000:02:00.0:   bridge window [mem 0xf8000000-0xfbffffff]
[    5.662472] pci 0000:00:1c.0: PCI bridge to [bus 02-03]
[    5.724955] pci 0000:00:1c.0:   bridge window [mem 0xf8000000-0xfbffffff]
[    5.806184] pci 0000:0e:0d.0: BAR 6: assigned [mem 0xfc100000-0xfc11ffff pref]
[    5.892617] pci 0000:00:1e.0: PCI bridge to [bus 0e]
[    5.951978] pci 0000:00:1e.0:   bridge window [io  0xb000-0xbfff]
[    6.024864] pci 0000:00:1e.0:   bridge window [mem 0xfc100000-0xfc2fffff]
[    6.106065] pci 0000:00:1e.0:   bridge window [mem 0xd8000000-0xdfffffff 64bit pref]
[    6.198978] NET: Registered protocol family 2
[    6.421533] TCP: Hash tables configured (established 262144 bind 65536)
[    6.500699] TCP: reno registered
[    6.539298] UDP hash table entries: 16384 (order: 7, 524288 bytes)
[    6.613452] UDP-Lite hash table entries: 16384 (order: 7, 524288 bytes)
[    6.692918] NET: Registered protocol family 1
[    6.746831] pci 0000:00:1f.0: rerouting interrupts for [8086:2670]
[    6.821072] Unpacking initramfs...
[    7.217789] Freeing initrd memory: 18320K (ffff880035c28000 - ffff880036e0c000)
[    7.305309] PCI-DMA: Using software bounce buffering for IO (SWIOTLB)
[    7.382369] software IO TLB [mem 0x7bb50000-0x7fb50000] (64MB) mapped at [ffff88007bb50000-ffff88007fb4ffff]
[    7.500507] microcode: CPU0 sig=0x10676, pf=0x40, revision=0x60c
[    7.572360] microcode: CPU1 sig=0x10676, pf=0x40, revision=0x60c
[    7.644215] microcode: CPU2 sig=0x10676, pf=0x40, revision=0x60c
[    7.716068] microcode: CPU3 sig=0x10676, pf=0x40, revision=0x60c
[    7.787921] microcode: CPU4 sig=0x10676, pf=0x40, revision=0x60c
[    7.859775] microcode: CPU5 sig=0x10676, pf=0x40, revision=0x60c
[    7.931621] microcode: CPU6 sig=0x10676, pf=0x40, revision=0x60c
[    8.003471] microcode: CPU7 sig=0x10676, pf=0x40, revision=0x60c
[    8.075386] microcode: Microcode Update Driver: v2.00 <tigran@aivazian.fsnet.co.uk>, Peter Oruba
[    8.181021] futex hash table entries: 2048 (order: 5, 131072 bytes)
[    8.745872] alg: No test for stdrng (krng)
[    8.794895] Block layer SCSI generic (bsg) driver version 0.4 loaded (major 252)
[    8.883492] io scheduler noop registered
[    8.930370] io scheduler deadline registered
[    8.981473] io scheduler cfq registered (default)
[    9.037862] pcieport 0000:00:02.0: device [8086:25e2] has invalid IRQ; check vendor BIOS
[    9.134988] pcieport 0000:00:03.0: device [8086:25e3] has invalid IRQ; check vendor BIOS
[    9.232050] pcieport 0000:00:04.0: device [8086:25f8] has invalid IRQ; check vendor BIOS
[    9.329165] pcieport 0000:00:06.0: device [8086:25f9] has invalid IRQ; check vendor BIOS
[    9.426279] pcieport 0000:00:1c.0: device [8086:2690] has invalid IRQ; check vendor BIOS
[    9.523186] Switched to clocksource tsc
[    9.523453] pcieport 0000:04:00.0: device [8086:3500] has invalid IRQ; check vendor BIOS
[    9.524525] pcieport 0000:05:00.0: device [8086:3510] has invalid IRQ; check vendor BIOS
[    9.525621] pcieport 0000:05:01.0: device [8086:3514] has invalid IRQ; check vendor BIOS
    9.526716] pcieport 0000:00:02.0: Signaling PME through PCIe PME interrupt
[    9.526718] pcieport 0000:04:00.0: Signaling PME through PCIe PME interrupt
[    9.526719] pcieport 0000:05:00.0: Signaling PME through PCIe PME interrupt
[    9.526720] pci 0000:06:00.0: Signaling PME through PCIe PME interrupt
[    9.526721] pci 0000:07:00.0: Signaling PME through PCIe PME interrupt
[    9.526723] pcieport 0000:05:01.0: Signaling PME through PCIe PME interrupt
[    9.526724] pci 0000:04:00.3: Signaling PME through PCIe PME interrupt
[    9.526743] pcieport 0000:00:03.0: Signaling PME through PCIe PME interrupt
[    9.526744] pci 0000:01:00.0: Signaling PME through PCIe PME interrupt
[    9.526763] pcieport 0000:00:04.0: Signaling PME through PCIe PME interrupt
[    9.526764] pci 0000:0a:00.0: Signaling PME through PCIe PME interrupt
[    9.526783] pcieport 0000:00:05.0: Signaling PME through PCIe PME interrupt
[    9.526801] pcieport 0000:00:06.0: Signaling PME through PCIe PME interrupt
[    9.526802] pci 0000:0c:00.0: Signaling PME through PCIe PME interrupt
[    9.526821] pcieport 0000:00:07.0: Signaling PME through PCIe PME interrupt
[    9.526848] pcieport 0000:00:1c.0: Signaling PME through PCIe PME interrupt
[    9.526849] pci 0000:02:00.0: Signaling PME through PCIe PME interrupt
[    9.526850] pci 0000:03:00.0: Signaling PME through PCIe PME interrupt
[    9.526874] pci_hotplug: PCI Hot Plug PCI Core version: 0.5
[    9.526894] pciehp: PCI Express Hot Plug Controller Driver version: 0.4
[   11.464271] ERST: Failed to get Error Log Address Range.
[   11.556209] GHES: APEI firmware first mode is enabled by WHEA _OSC.[   11.726574] 00:03: ttyS0 at I/O 0x3f8 (irq = 4, base_baud = 115200) is a 16550A
[   11.834432] 00:04: ttyS1 at I/O 0x2f8 (irq = 3, base_baud = 115200) is a 16550A
[   11.922237] Linux agpgart interface v0.103
[   11.971374] i8042: PNP: No PS/2 controller found. Probing ports directly.
[   12.055476] serio: i8042 KBD port at 0x60,0x64 irq 1
[   12.114850] serio: i8042 AUX port at 0x60,0x64 irq 12
[   12.175411] mousedev: PS/2 mouse device common for all mice
[   12.242110] rtc_cmos 00:01: RTC can wake from S4
[   12.297446] rtc_cmos 00:01: rtc core: registered rtc_cmos as rtc0
[   12.370689] rtc_cmos 00:01: alarms up to one day, y3k, 242 bytes nvram, hpet irqs
[   12.460234] hpet1: lost 4 rtc interrupts
[   12.507143] ledtrig-cpu: registered to indicate activity on CPUs
[   12.579611] AMD IOMMUv2 driver by Joerg Roedel <joerg.roedel@amd.com>
[   12.656646] AMD IOMMUv2 functionality not available on this system
[   12.730663] TCP: cubic registered
[   12.770393] NET: Registered protocol family 10
[   12.823859] mip6: Mobile IPv6
[   12.859296] NET: Registered protocol family 17
[   12.912416] mpls_gso: MPLS GSO support
[   12.957643] registered taskstats version 1
[   13.009332] rtc_cmos 00:01: setting system clock to 2015-01-25 04:18:57 UTC (1422159537)
[   13.365730] Freeing unused kernel memory: 220K (ffff8800017c9000 - ffff880001800000)
Loading, please [   13.467146] systemd-udevd[95]: starting version 215
wait...
[   13.534116] random: systemd-udevd urandom read with 12 bits of entropy available
[   13.642090] bnx2: Broadcom NetXtreme II Gigabit Ethernet Driver bnx2 v2.2.5 (December 20, 2013)
[   13.746921] SCSI subsystem initialized
[   13.747370] bnx2 0000:03:00.0 eth0: Broadcom NetXtreme II BCM5708 1000Base-T (B2) PCI-X 64-bit 133MHz found at mem f8000000, IRQ 16, node addr 00:1e:c9:fc:b7:27
[   13.750011] bnx2 0000:07:00.0 eth1: Broadcom NetXtreme II BCM5708 1000Base-T (B2) PCI-X 64-bit 133MHz found at mem f4000000, IRQ 16, node addr 00:1e:c9:fc:b7:29
[   14.135454] ACPI: bus type USB registered
[   14.183429] usbcore: registered new interface driver usbfs
[   14.249049] usbcore: registered new interface driver hub
[   14.312732] usbcore: registered new device driver usb
[   14.312822] Fusion MPT base driver 3.04.20
[   14.312822] Copyright (c) 1999-2008 LSI Corporation
[   14.481545] ehci_hcd: USB 2.0 'Enhanced' Host Controller (EHCI) Driver
[   14.560322] uhci_hcd: USB Universal Host Controller Interface driver
[   14.636793] uhci_hcd 0000:00:1d.0: UHCI Host Controller
[   14.699293] uhci_hcd 0000:00:1d.0: new USB bus registered, assigned bus number 1
[   14.787811] uhci_hcd 0000:00:1d.0: detected 2 ports
[   14.914996] usb usb1: New USB device found, idVendor=1d6b, idProduct=0001
[   14.915036] Fusion MPT SAS Host driver 3.04.20
[   14.915338] mptbase: ioc0: Initiating bringup
[   15.101401] usb usb1: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   15.187820] usb usb1: Product: UHCI Host Controller
[   15.246146] usb usb1: Manufacturer: Linux 3.16.0-4-amd64 uhci_hcd
[   15.246255] ehci-pci: EHCI PCI platform driver
[   15.372138] usb usb1: SerialNumber: 0000:00:1d.0
[   15.427752] qla2xxx [0000:00:00.0]-0005: : QLogic Fibre Channel HBA Driver: 8.07.00.08-k.
[   15.427767] hub 1-0:1.0: USB hub found
[   15.427776] hub 1-0:1.0: 2 ports detected
[   15.428204] uhci_hcd 0000:00:1d.1: UHCI Host Controller
[   15.428211] uhci_hcd 0000:00:1d.1: new USB bus registered, assigned bus number 2
[   15.428224] uhci_hcd 0000:00:1d.1: detected 2 ports
[   15.428266] uhci_hcd 0000:00:1d.1: irq 20, io base 0x0000acc0
[   15.428324] usb usb2: New USB device found, idVendor=1d6b, idProduct=0001
[   15.428326] usb usb2: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   15.428327] usb usb2: Product: UHCI Host Controller
[   15.428328] usb usb2: Manufacturer: Linux 3.16.0-4-amd64 uhci_hcd
[   15.428329] usb usb2: SerialNumber: 0000:00:1d.1
[   15.428454] hub 2-0:1.0: USB hub found
[   15.428461] hub 2-0:1.0: 2 ports detected
[   15.428793] uhci_hcd 0000:00:1d.2: UHCI Host Controller
[   15.428798] uhci_hcd 0000:00:1d.2: new USB bus registered, assigned bus number 3
[   15.428806] uhci_hcd 0000:00:1d.2: detected 2 ports
[   15.428827] uhci_hcd 0000:00:1d.2: irq 21, io base 0x0000aca0
[   15.428876] usb usb3: New USB device found, idVendor=1d6b, idProduct=0001
[   15.428878] usb usb3: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   15.428879] usb usb3: Product: UHCI Host Controller
[   15.428881] usb usb3: Manufacturer: Linux 3.16.0-4-amd64 uhci_hcd
[   15.428882] usb usb3: SerialNumber: 0000:00:1d.2
[   15.429007] hub 3-0:1.0: USB hub found
[   15.429016] hub 3-0:1.0: 2 ports detected
[   15.429339] uhci_hcd 0000:00:1d.3: UHCI Host Controller
[   15.429344] uhci_hcd 0000:00:1d.3: new USB bus registered, assigned bus number 4
[   15.429352] uhci_hcd 0000:00:1d.3: detected 2 ports
[   15.429371] uhci_hcd 0000:00:1d.3: irq 20, io base 0x0000ac80
[   15.429423] usb usb4: New USB device found, idVendor=1d6b, idProduct=0001
[   15.429424] usb usb4: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   15.429426] usb usb4: Product: UHCI Host Controller
[   15.429427] usb usb4: Manufacturer: Linux 3.16.0-4-amd64 uhci_hcd
[   15.429428] usb usb4: SerialNumber: 0000:00:1d.3
[   15.429553] hub 4-0:1.0: USB hub found
[   15.429560] hub 4-0:1.0: 2 ports detected
[   15.430342] ehci-pci 0000:00:1d.7: EHCI Host Controller
[   15.430349] ehci-pci 0000:00:1d.7: new USB bus registered, assigned bus number 5
[   15.430364] ehci-pci 0000:00:1d.7: debug port 1
[   15.434274] ehci-pci 0000:00:1d.7: irq 21, io mem 0xfca00000
[   15.444019] ehci-pci 0000:00:1d.7: USB 2.0 started, EHCI 1.00
[   15.444056] usb usb5: New USB device found, idVendor=1d6b, idProduct=0002
[   15.444058] usb usb5: New USB device strings: Mfr=3, Product=2, SerialNumber=1
[   15.444059] usb usb5: Product: EHCI Host Controller
[   15.444061] usb usb5: Manufacturer: Linux 3.16.0-4-amd64 ehci_hcd
[   15.444062] usb usb5: SerialNumber: 0000:00:1d.7
[   15.444208] hub 5-0:1.0: USB hub found
[   15.444215] hub 5-0:1.0: 8 ports detected
[   15.468063] hub 1-0:1.0: USB hub found
[   15.468069] hub 1-0:1.0: 2 ports detected
[   15.492062] hub 2-0:1.0: USB hub found
[   15.492068] hub 2-0:1.0: 2 ports detected
[   15.516061] hub 3-0:1.0: USB hub found
[   15.516067] hub 3-0:1.0: 2 ports detected
[   15.540065] hub 4-0:1.0: USB hub found
[   15.540071] hub 4-0:1.0: 2 ports detected
[   15.616016] ioc0: LSISAS1068E B3: Capabilities={Initiator}
[   19.343058] scsi1 : ata_piix
[   19.456654] usb 5-5: New USB device strings: Mfr=0, Product=0, SerialNumber=0
[   19.456858] scsi2 : ata_piix
[   19.456916] ata1: PATA max UDMA/100 cmd 0x1f0 ctl 0x3f6 bmdma 0xfc00 irq 14
[   19.456917] ata2: PATA max UDMA/100 cmd 0x170 ctl 0x376 bmdma 0xfc08 irq 15
[   19.464144] scsi0 : qla2xxx
[   19.464584] qla2xxx [0000:0a:00.0]-00fb:0: QLogic QLE2460 - PCI-Express Single Channel 4Gb Fibre Channel HBA.
[   19.464590] qla2xxx [0000:0a:00.0]-00fc:0: ISP2432: PCIe (2.5GT/s x4) @ 0000:0a:00.0 hdma+ host#=0 fw=7.01.00 (9496).
[   19.464714] qla2xxx [0000:0c:00.0]-001d: : Found an ISP2432 irq 16 iobase 0xffffc90003158000.
[   19.620442] ata1.00: ATAPI: TEAC CD-ROM CD-224E-N, 3.AC, max UDMA/33
[   19.636256] ata1.00: configured for UDMA/33
[   19.636770] scsi: waiting for bus probes to complete ...
[   19.832140] scsi3 : qla2xxx
[   19.832468] qla2xxx [0000:0c:00.0]-00fb:3: QLogic QLE2460 - PCI-Express Single Channel 4Gb Fibre Channel HBA.
[   19.832472] qla2xxx [0000:0c:00.0]-00fc:3: ISP2432: PCIe (2.5GT/s x4) @ 0000:0c:00.0 hdma+ host#=3 fw=7.01.00 (9496).
[   20.593999] qla2xxx [0000:0a:00.0]-505f:0: Link is operational (2 Gbps).
[   20.594001] [sched_delayed] sched: RT throttling activated
5
[   21.467977] scsi: waiting for bus probes to complete ...
[   21.578712] sr0: scsi3-mmc drive: 24x/24x cd/rw xa/form2 cdda tray
[   21.652642] cdrom: Uniform CD-ROM driver Revision: 3.20
[   21.715995] sr 1:0:0:0: Attached scsi generic sg0 type 5
[   46.419982] scsi4: error handler thread failed to spawn, error = -4
[   46.494964] mptsas: ioc0: WARNING - Unable to register controller with SCSI subsystem
[   46.588746] BUG: unable to handle kernel NULL pointer dereference at 0000000000000060
[   46.592658] IP: [<ffffffff8150bace>] mutex_lock+0xe/0x2a
[   46.592658] PGD 0
[   46.592658] Oops: 0002 [#1] SMP
[   46.592658] Modules linked in: sg sr_mod cdrom ata_generic ata_piix ehci_pci qla2xxx mptsas(+) libata uhci_hcd scsi_transport_sas ehci_hcd mptscsih scsi_transport_fc mptbase scsi_tgt usbcore usb_common scsi_mod bnx2
[   46.592658] CPU: 4 PID: 101 Comm: systemd-udevd Not tainted 3.16.0-4-amd64 #1 Debian 3.16.7-ckt2-1
[   46.592658] Hardware name: Dell Inc. PowerEdge 1950/0M788G, BIOS 2.5.0 09/12/2008
[   46.592658] task: ffff88085b5e0aa0 ti: ffff88085b6f8000 task.ti: ffff88085b6f8000
[   46.592658] RIP: 0010:[<ffffffff8150bace>]  [<ffffffff8150bace>] mutex_lock+0xe/0x2a
[   46.592658] RSP: 0018:ffff88085b6fbb98  EFLAGS: 00010287
[   46.592658] RAX: 0000000000000001 RBX: 0000000000000060 RCX: 00000000c0000100
[   46.592658] RDX: ffff88085b6fbfd8 RSI: ffff88085b5e0aa0 RDI: ffff88087fd13280
[   46.592658] R10: dfde1c295817c0b8 R11: 0000000000000008 R12: ffff88085f159000
[   46.592658] R13: ffff88085f159098 R14: ffffffffa00ba410 R15: 0000000000000001
[   46.592658] FS:  00007fc0eb78e880(0000) GS:ffff88087fd00000(0000) knlGS:0000000000000000
[   46.592658] CS:  0010 DS: 0000 ES: 0000 CR0: 000000008005003b
[   46.592658] CR2: 0000000000000060 CR3: 000000085b6cc000 CR4: 00000000000007e0
[   46.592658] Stack:
[   46.592658]  0000000000000000 ffffffffa001a878 0000000000000000 ffff88085bbf3000
[   46.592658]  ffff88085f159000 ffffffffa0087222 ffff88085bbf3000 00000000ffffffff
[   46.592658]  ffff88085f159000 ffffffffa00b6098 ffff88085f159000 0000000000000000
[   46.592658] Call Trace:
[   46.592658]  [<ffffffffa001a878>] ? scsi_remove_host+0x18/0x110 [scsi_mod]
[   46.592658]  [<ffffffffa0087222>] ? mptscsih_remove+0x22/0x80 [mptscsih]
[   46.592658]  [<ffffffffa00b6098>] ? mptsas_probe+0x398/0x4a0 [mptsas]
[   46.592658]  [<ffffffff812e03bf>] ? local_pci_probe+0x3f/0xa0
[   46.592658]  [<ffffffff812e16aa>] ? pci_device_probe+0xda/0x130
[   46.592658]  [<ffffffff8139f5fd>] ? driver_probe_device+0x9d/0x3d0
[   46.592658]  [<ffffffff8139f9fb>] ? __driver_attach+0x8b/0x90
[   46.592658]  [<ffffffff8139f970>] ? __device_attach+0x40/0x40
[   46.592658]  [<ffffffff8139d70b>] ? bus_for_each_dev+0x5b/0x90
[   46.592658]  [<ffffffff8139ec90>] ? bus_add_driver+0x180/0x250
[   46.592658]  [<ffffffffa0063000>] ? 0xffffffffa0062fff
   46.592658]  [<ffffffff810d8d1a>] ? load_module+0x20da/0x26b0
[   46.592658]  [<ffffffff810d4900>] ? store_uevent+0x40/0x40
[   46.592658]  [<ffffffff810d944d>] ? SyS_finit_module+0x7d/0xa0
[   46.592658]  [<ffffffff8150d32d>] ? system_call_fast_compare_end+0x10/0x15
[   46.592658] Code: ff ff b8 01 00 00 00 e9 9b fe ff ff 90 e8 4b e4 ff ff e9 c0 fe ff ff 66 0f 1f 44 00 00 66 66 66 66 90 53 48 89 fb e8 92 e3 ff ff <f0> ff 0b 79 08 48 89 df e8 25 fe ff ff 65 48 8b 04 25 80 b8 00
[   46.592658] RIP  [<ffffffff8150bace>] mutex_lock+0xe/0x2a
[   46.592658]  RSP <ffff88085b6fbb98>
[   46.592658] CR2: 0000000000000060
[   50.146177] ---[ end trace 9ccd01cf5f90349e ]---
[   97.756507] random: nonblocking pool is initialized
Begin: Loading e[  165.872767] device-mapper: uevent: version 1.0.3
ssential drivers[  165.942082] device-mapper: ioctl: 4.27.0-ioctl (2013-10-30) initialised: dm-devel@redhat.com
 ... done.
Begin: Running /scripts/init-premount ... done.
Begin: Mounting root file system ... Begin: Running /scripts/local-top ... done.
Begin: Waiting for root file system ... done.
[  286.522209] ohci_hcd: USB 1.1 'Open' Host Controller (OHCI) Driver
Gave up waiting [  286.598966] hidraw: raw HID events driver (C) Jiri Kosina
for root device.[  286.679121] usbcore: registered new interface driver usbhid
s:
 - Boot args (cat /proc/cmdline)
   - Check rootdelay= (did the system wait long enough?)
   - Check root= (did the system wait for the right device?)
 - Missing modules (cat /proc/modules; ls /dev)
ALERT!  /dev/disk/by-uuid/39c20811-40cb-4c49-8b23-a25bb15208c0 does not exist.  Dropping to a shell!
(initramfs) ls /dev/disk/by-id
drwxr-xr-x 2 0 0 60 .
drwxr-xr-x 3 0 0 60 ..
lrwxrwxrwx 1 0 0  9 ata-TEAC_CD-ROM_CD-224E-N -> ../../sr0

Bill

-- 

Bill MacAllister
System Programmer, Stanford University


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