singularity container: pb with libEGL.so.1

Hi,
I'm trying to run a singularity container for a paraview app.
I wish to use the nvidia driver on my host (debian/bullseye).

When I run the image, I end with an error:

singularity shell --nv paraview-visualizer.sif

Singularity> export TRAME_APP=pv_visualizer

Singularity> pvpython -m paraview.apps.trame --data ~

/opt/paraview/bin/pvpython-real: /lib/x86_64-linux-gnu/libc.so.6: version `GLIBC_2.33' not found (required by /.singularity.d/libs/libEGL.so.1)

At this point, I suspect some libgl incompatibilities

But, having a deeper look at my host setup, I have seen that:

~$ ls -l /usr/lib/x86_64-linux-gnu/libGL.so.1 /etc/alternatives/glx--libGL.so.1-x86_64-linux-gnu

lrwxrwxrwx 1 root root 50 Nov 6 2020 /etc/alternatives/glx--libGL.so.1-x86_64-linux-gnu -> /usr/lib/mesa-diverted/x86_64-linux-gnu/libGL.so.1

lrwxrwxrwx 1 root root 50 Nov 9 2017 /usr/lib/x86_64-linux-gnu/libGL.so.1 -> /etc/alternatives/glx--libGL.so.1-x86_64-linux-gnu

~$ ls -l /usr/lib/x86_64-linux-gnu/libEGL.so.1 /etc/alternatives/glx--libEGL.so.1-x86_64-linux-gnu

lrwxrwxrwx 1 root root 51 Nov 6 2020 /etc/alternatives/glx--libEGL.so.1-x86_64-linux-gnu -> /usr/lib/mesa-diverted/x86_64-linux-gnu/libEGL.so.1

lrwxrwxrwx 1 root root 51 Nov 6 2017 /usr/lib/x86_64-linux-gnu/libEGL.so.1 -> /etc/alternatives/glx--libEGL.so.1-x86_64-linux-gnu

and

sudo update-glx --config glx

There are 3 choices for the alternative glx (providing /usr/lib/glx).

Selection Path Priority Status

------------------------------------------------------------

* 0 /usr/lib/nvidia 100 auto mode

1 /usr/lib/mesa-diverted 5 manual mode

2 /usr/lib/nvidia 100 manual mode

3 /usr/lib/nvidia/bumblebee 95 manual mode

It seems strange that the libGL and LibEGL library still point to mesa instead of nvidia

since nvidia-driver (470.103.01-2) is installed on my host

Can you confirm that I have something broken at this point?

Is this a known issue?

Best, C

Christophe TROPHIME
Research Engineer

CNRS - LNCMI
25, rue des Martyrs
BP 166
38042 GRENOBLE Cedex 9
FRANCE

Tel : +33 (0)4 76 88 90 02
Fax : +33 (0) 4 76 88 10 01
Office U 19
M@il : christophe.trophime@lncmi.cnrs.fr

Bootstrap: docker #From: ubuntu:focal From: debian:bookworm # From: kitware/trame:1.2-glvnd-runtime-ubuntu20.04-py39 %environment export PATH=/opt/paraview/bin:$PATH export LANG=en_US.UTF-8 export LANGUAGE=en_US.UTF-8 export LC_ALL=C.UTF-8 export OMPI_MCA_btl_vader_single_copy_mechanism=none export PYTHONPATH=/usr/local/lib/python3.9/dist-packages:$PYTHONPATH PORT=8080 ALLOW_HTTP=true URL=localhost export PORT ALLOW_HTTP URL %labels AUTHOR christophe.trophime@lncmi.cnrs.fr Maintainer Christophe Trophime Maintainer_email christophe.trophime@lncmi.cnrs.fr Version 1.0 %post # install apt-get -qq update apt-get -y install lsb-release sudo apt-file locate tree apt-get -y install curl wget apt-get -y install git DEBIAN_FRONTEND=noninteractive apt-get install -y --no-install-recommends tzdata git DEBIAN_FRONTEND=noninteractive apt-get -y install python-is-python3 python3-pip DEBIAN_FRONTEND=noninteractive apt-get -y install python3.9-minimal python3.9-distutils python3.9-venv libpython3.9-dev apt-get -y install openmpi-bin openmpi-common # Required to run ParaView apt-get install -y --no-install-recommends libxrender1 libxcursor1 libsm6 libxkbcommon-x11-0 fontconfig # Install Trame update-alternatives --install /usr/bin/python python /usr/bin/python3.9 1 python3.9 -m pip install "trame" python3.9 -m pip install "vtk>=9.1.0" apt-file update updatedb # Install Paraview wget "https://www.paraview.org/paraview-downloads/download.php?submit=Download&version=v5.10&type=binary&os=Linux&downloadFile=ParaView-5.10.0-egl-MPI-Linux-Python3.9-x86_64.tar.gz"; -O /tmp/ParaView-5.10.0-MPI-Linux-Python3.9-x86_64.tar.gz tar zxf /tmp/ParaView-5.10.0-MPI-Linux-Python3.9-x86_64.tar.gz mkdir -p /opt mv ParaView-5.10.0-egl-MPI-Linux-Python3.9-x86_64 paraview mv paraview /opt rm -rf /tmp/ParaView-5.10.0-MPI-Linux-Python3.9-x86_64.tar.gz # Install paraview-visualizer python3.9 -m pip install "pv-visualizer"

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