Re: Genetics Program
On 7 December 2005 at 17:07, Christopher David Desjardins wrote:
| Hi-
| I am MSc student at the University of Alberta studying ecology.
| Recently I've decide to dive into population genetics and I am curious
| if there are any good genetics programs available for linux and debian
| in particular?
There's a ton in Debian in general:
edd@basebud:~> apt-cache search bio | wc -l
186
edd@basebud:~> apt-cache search genetic | wc -l
32
More generally, one place that has a few overview review article is the
Genome Canada / Canadian BioInformatics Help Desk Newsletter hosted at your
very own U of Alberta. Bela Tiware has on overview of live distros here:
http://gchelpdesk.ualberta.ca/news/03mar05/cbhd_news_03mar05.php#GearingUp
and Bela and I have an article about my Quantian distro here:
http://gchelpdesk.ualberta.ca/news/30jun05/cbhd_news_30jun05.php#Quantian
The next Quantian release will have once again a large selection of tools
incl a complete set of BioConductor packages (that part is not in Debian) but
dozens of packages from Debian from the BioPython, BioPerl, Bio"Anything"
area such as bioperl python-biopython blast2 clustalw clustalx seaview hmmer
and more.
Hope this helps, Dirk
--
Statistics: The (futile) attempt to offer certainty about uncertainty.
-- Roger Koenker, 'Dictionary of Received Ideas of Statistics'
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