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Bug#1082552: marked as done (transition: petsc and numerical library stack)

Your message dated Wed, 4 Dec 2024 23:28:30 +0100
with message-id <02b278f9-15dc-4665-8196-7e4a4a921c48@debian.org>
and subject line Re: Bug#1082552: #1082552: transition: petsc and numerical library stack
has caused the Debian Bug report #1082552,
regarding transition: petsc and numerical library stack
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1082552: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1082552
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: release.debian.org
Severity: normal
X-Debbugs-Cc: petsc@packages.debian.org, debian-science@lists.debian.org
Control: affects -1 + src:petsc
User: release.debian.org@packages.debian.org
Usertags: transition

I'd like to update the numerical library stack, for petsc and related
libraries. Libraries have been built and passing tests in
experimental.

superlu  6 → 7
hypre    2.29 → 2.31
mumps    5.6 → 5.7
adios2   2.9 → 2.10
petsc    3.20 → 3.21
slepc    3.20 → 3.21
sundials 6 → 7


This transition is probably best started after the gmsh transition
#1081740 though this is not a strict requirement.

We'll also update pybind11 from 2.13.5 to 2.13.6. This is not a
transition, but it's best to have the pybind11 patch release updated
before uploading the new libraries.

Paraview will be updated from 5.12 to 5.13 (also not a transition)

superlu-dist ought to be updated to 9, but we're waiting for
communication from upstream about FTBFS. No point holding up the other
libraries while we wait for an answer.

I've confirmed dolfinx builds and runs successfully against the
updated libraries.

The libraries ready for transition have auto tracking pages:

https://release.debian.org/transitions/html/auto-superlu.html
https://release.debian.org/transitions/html/auto-hypre.html
https://release.debian.org/transitions/html/auto-mumps.html
https://release.debian.org/transitions/html/auto-adios2.html
https://release.debian.org/transitions/html/auto-petsc.html
https://release.debian.org/transitions/html/auto-slepc.html
https://release.debian.org/transitions/html/auto-sundials.html


Ben file:

title = "petsc";
is_affected = .depends ~ "libpetsc-real3.20" | .depends ~ "libpetsc-real3.21";
is_good = .depends ~ "libpetsc-real3.21";
is_bad = .depends ~ "libpetsc-real3.20";

--- End Message ---
--- Begin Message --- 
On 04/12/2024 22:10, Drew Parsons wrote:

On 2024-12-04 20:53, Emilio Pozuelo Monfort wrote:

On 04/12/2024 17:52, Drew Parsons wrote:


Looks like britney sorted it out eventually anyway.
If you mean the autopkgtest, that was Graham scheduling tests with cmake/sid upon my request. 



Ah, now the pixies behind the music in the garden are revealed :)


:-)
With a few extra hints, openmpi et al have migrated to testing. The petsc transition and friends is complete, you can upload sundials again with the cmake fix.
As for openmpi, there are a couple of rdeps left in testing. I have added an extra hint, and I think we can finish it (i.e. have the old library package removed from testing) in the next britney run. 

Cheers,
Emilio

--- End Message ---
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