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Bug#1023731: BioC Transition blocked by new dependencies



On 11/21/22 16:39, Andreas Tille wrote:
Am Mon, Nov 21, 2022 at 03:05:26PM +0100 schrieb Sebastian Ramacher:
On 2022-11-21 15:02:16 +0100, Andreas Tille wrote:
Some of the BioConductor packages need new dependencies.
I have pushed these to new queue and set the ITP bugs as
blocker.

As this is happening every r-bioc transition, could this be handled
before starting the transition the next time?

This is really hard to do, thought.  The new packages are needing those
packages from the transition.  I actually injected two packages from
higher levels manually to be able to build one of the new packages.  So
we really need to upload the start of the transition and I do not see
any sense in not documenting what we are doing without the transition
tracker.

You can rebuild the packages that are already in the archive and include them in a local repo (e.g. managed with reprepro) and used by the chroot where the rebuilds are performed. Use that to prepare the NEW uploads to experimental, file the transition bugreport once all packages have passed NEW, and move those to unstable once the transition is ACKed.

Kind Regards,

Bas

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