Bug#985717: unblock: gemma/0.98.4+dfsg-2
Package: release.debian.org
Severity: normal
User: release.debian.org@packages.debian.org
Usertags: unblock
X-Debbugs-Cc: 985004@bugs.debian.org
Please unblock package gemma
[ Reason ]
Closes bug #985004
[ Impact ]
Leaf package no expected impact.
[ Tests ]
There is an autopkgtest.
[ Risks ]
Since the only change was to simply shorten the autopkgtest on a single
architecture armhf that simply can not cope with this package in time
there is no risk to be expected. The package will never be used in
practice on this kind of architecture.
[ Checklist ]
[*] all changes are documented in the d/changelog
[*] I reviewed all changes and I approve them
I realised to late that there is a useless cut-n-pasto
comment remaining which is removed in Git but it does
not rectify another upload.
[*] attach debdiff against the package in testing
unblock gemma/0.98.4+dfsg-2
diff -Nru gemma-0.98.4+dfsg/debian/changelog gemma-0.98.4+dfsg/debian/changelog
--- gemma-0.98.4+dfsg/debian/changelog 2021-02-02 20:59:26.000000000 +0100
+++ gemma-0.98.4+dfsg/debian/changelog 2021-03-22 14:09:15.000000000 +0100
@@ -1,3 +1,11 @@
+gemma (0.98.4+dfsg-2) unstable; urgency=medium
+
+ * Team upload.
+ * Do only one test for armhf to reduce test time
+ Closes: #985004
+
+ -- Andreas Tille <tille@debian.org> Mon, 22 Mar 2021 14:09:15 +0100
+
gemma (0.98.4+dfsg-1) unstable; urgency=medium
* Team upload.
diff -Nru gemma-0.98.4+dfsg/debian/tests/run-sample-analysis gemma-0.98.4+dfsg/debian/tests/run-sample-analysis
--- gemma-0.98.4+dfsg/debian/tests/run-sample-analysis 2021-02-02 20:51:38.000000000 +0100
+++ gemma-0.98.4+dfsg/debian/tests/run-sample-analysis 2021-03-22 14:09:15.000000000 +0100
@@ -16,6 +16,14 @@
gemma -g mouse_hs1940.geno.txt.gz -p mouse_hs1940.pheno.txt \
-a mouse_hs1940.anno.txt -gk -o mouse_hs1940
+hostarch=$(dpkg-architecture -qDEB_HOST_ARCH)
+
+# Ignore single test on armhf and i386 (see bug #972553)
+if [ "$hostarch" = "armhf" ] ; then
+ echo "Do only one test for $hostarch to reduce test time (see bug #985004)"
+ exit 0
+fi
+
gemma -g mouse_hs1940.geno.txt.gz -p mouse_hs1940.pheno.txt -n 1 \
-a mouse_hs1940.anno.txt -k ./output/mouse_hs1940.cXX.txt -lmm \
-o mouse_hs1940_CD8_lmm
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