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Bug#952414: marked as done (buster-pu: package ncbi-blast+/2.8.1-1+deb10u1)

Your message dated Sat, 09 May 2020 11:53:52 +0100
with message-id <fd7fa4d56896c35aab49a5a51cb69727dc60e87a.camel@adam-barratt.org.uk>
and subject line Closing requests included in 10.4 point release
has caused the Debian Bug report #952414,
regarding buster-pu: package ncbi-blast+/2.8.1-1+deb10u1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
952414: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=952414
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: release.debian.org
Severity: normal
Tags: buster
User: release.debian.org@packages.debian.org
Usertags: pu

Per #951280, x86 builds of ncbi-blast+ accidentally wound up requiring
SSE 4.2, breaking execution on older processors.  I've prepared an
update (patch attached, or at [SALSA]) adding a configure flag that
eliminates this inappropriate requirement.  (The flag is a no-op on
other architectures, and as such safe to supply unconditionally.)

May I please proceed with an upload targeting buster?

Thanks!

[SALSA] https://salsa.debian.org/med-team/ncbi-blastplus/commit/9285809bf75c98ac69ecf20add0d7415faa2d697

diff --git a/debian/changelog b/debian/changelog
index 36c35188..141d1772 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,10 @@
+ncbi-blast+ (2.8.1-1+deb10u1) buster; urgency=medium
+
+  * debian/rules: DEB_CONFIGURE_EXTRA_FLAGS += --without-sse42.
+    (Closes: #951280.)
+
+ -- Aaron M. Ucko <ucko@debian.org>  Sun, 23 Feb 2020 20:11:40 -0500
+
 ncbi-blast+ (2.8.1-1) unstable; urgency=medium
 
   * New upstream release.
diff --git a/debian/rules b/debian/rules
index b017193c..15568fa7 100755
--- a/debian/rules
+++ b/debian/rules
@@ -14,7 +14,7 @@ DEB_CONFIGURE_EXTRA_FLAGS=--with-dll --with-mt --without-autodep \
     --without-makefile-auto-update --with-flat-makefile --without-caution \
     --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ \
     --with-build-root=BUILD --without-debug --without-downloaded-vdb \
-    --with-mbedtls
+    --with-mbedtls --without-sse42
 proj=algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/
 
 #ifneq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS)))

--- End Message ---
--- Begin Message --- 
Package: release.debian.org
Version: 10.4

Hi,

Each of the uploads referred to by these bugs was included in today's
stable point release.

Regards,

Adam

--- End Message ---
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