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Bug#933623: transition: petsc



Package: release.debian.org
Severity: normal
User: release.debian.org@packages.debian.org
Usertags: transition

The hypre 2.16.0 upgrade revealed an incompatibility between petsc 3.10
and hypre 2.16.0.  PETSc upstream has dealt with the issue with a
couple of recent patches.  The best way to stabilise hypre and petsc
is to proceed with the petsc 3.11 transition.

The slepc 3.11 transition should be considered part of this
transition. I'm also upgrading dolfin to 2019.1.0 (which is really a
just a fenics upgrade rather than a library transition).

A mumps 5.2.0 transition is waiting, but I'll wait for this one to
clear before starting that.

Ben file:

title = "petsc";
is_affected = .depends ~ /\b(libpetsc\-complex3\.11|libpetsc\-complex3\.11\-dbg|libpetsc\-complex3\.11\-dev|libpetsc\-real3\.11|libpetsc\-real3\.11\-dbg|libpetsc\-real3\.11\-dev|libpetsc3\.11\-dev\-common|libpetsc3\.11\-dev\-examples|petsc3\.11\-doc|libpetsc\-complex3\.10|libpetsc\-complex3\.10\-dbg|libpetsc\-complex3\.10\-dev|libpetsc\-real3\.10|libpetsc\-real3\.10\-dbg|libpetsc\-real3\.10\-dev|libpetsc3\.10\-dev\-common|libpetsc3\.10\-dev\-examples|petsc3\.10\-doc)\b/;
is_good = .depends ~ /\b(libpetsc\-complex3\.11|libpetsc\-complex3\.11\-dbg|libpetsc\-complex3\.11\-dev|libpetsc\-real3\.11|libpetsc\-real3\.11\-dbg|libpetsc\-real3\.11\-dev|libpetsc3\.11\-dev\-common|libpetsc3\.11\-dev\-examples|petsc3\.11\-doc)\b/;
is_bad = .depends ~ /\b(libpetsc\-complex3\.10|libpetsc\-complex3\.10\-dbg|libpetsc\-complex3\.10\-dev|libpetsc\-real3\.10|libpetsc\-real3\.10\-dbg|libpetsc\-real3\.10\-dev|libpetsc3\.10\-dev\-common|libpetsc3\.10\-dev\-examples|petsc3\.10\-doc)\b/;


-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled


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