Hi Jonathan,
smcfcs version 1.6.1 seems to fail one of it's test with the log pasted below.
Same is seen in our CI as well[1].
Could you please consider taking a look?
[1]: https://salsa.debian.org/r-pkg-team/r-cran-smcfcs/-/jobs/2401741
Regards,
Nilesh
── Failure (test_parallel.r:24:3): smcfcs.parallel works with 1 imputation per core ───────────────────────────
`{ ... }` threw an error.
Message: 2 nodes produced errors; first error: Event indicator for coxph must be coded 0/1 for censoring/event.
Class: simpleError/error/condition
Backtrace:
█
1. ├─testthat::expect_error(...) test_parallel.r:24:2
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat:::.capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─smcfcs::smcfcs.parallel(...) test_parallel.r:36:4
7. └─parallel::parLapply(...)
8. ├─base::do.call(...)
9. └─parallel::clusterApply(...)
10. └─parallel:::staticClusterApply(cl, fun, length(x), argfun)
11. └─parallel:::checkForRemoteErrors(val)
[ FAIL 1 | WARN 0 | SKIP 15 | PASS 27 ]
Error: Test failures
In addition: Warning messages:
1: closing unused connection 6 (<-localhost:11108)
2: closing unused connection 5 (<-localhost:11108)
Execution halted
Attachment:
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