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Bug#912565: marked as done (shogun FTBFS with libjson-c-dev 0.13.1+dfsg-2)

Your message dated Mon, 12 Aug 2019 15:07:31 +0000
with message-id <E1hxBv1-000EJc-Re@fasolo.debian.org>
and subject line Bug#912565: fixed in shogun 3.2.0-9
has caused the Debian Bug report #912565,
regarding shogun FTBFS with libjson-c-dev 0.13.1+dfsg-2
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
912565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912565
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: shogun
Severity: important

Dear Maintainer,

We updated llvm-defaults to llvm-toolchain-7.
This package FTBFS using this version (but not sure it is related)
[ 37%] Building CXX object src/shogun/CMakeFiles/libshogun.dir/io/SerializableJsonFile.cpp.o
cd /build/shogun-3.2.0/debian/build/src/shogun && /usr/bin/c++  -DDSFMT_MEXP=19937 -DHAVE_ARPACK -DHAVE_ATLAS -DHAVE_COLPACK -DHAVE_CURL -DHAVE_CXX11 -DHAVE_CXX11_ATOMIC -DHAVE_DECL_SIGNGAM -DHAVE_DOXYGEN -DHAVE_EIGEN3 -DHAVE_FPCLASS -DHAVE_HDF5 -DHAVE_ISINF -DHAVE_ISNAN -DHAVE_JSON -DHAVE_LAPACK
-DHAVE_LARGEFILE -D\
HAVE_LGAMMAL -DHAVE_LOG2 -DHAVE_NLOPT -DHAVE_POWL -DHAVE_PROTOBUF -DHAVE_PTHREAD -DHAVE_SQRTL -DHAVE_SSE2 -DHAVE_STD_ISFINITE -DHAVE_STD_ISINF -DHAVE_STD_ISNAN -DHAVE_STD_UNORDERED_MAP -DHAVE_XML -DSFMT_MEXP=19937 -DSHOGUN -DSWIG_TYPE_TABLE=shogun -DUSE_BIGSTATES -DUSE_BOOL -DUSE_BZIP2 -DUSE_CHAR
-DUSE_COMPLEX128 -D\
USE_FLOAT32 -DUSE_FLOAT64 -DUSE_GLPK -DUSE_GZIP -DUSE_HMMCACHE -DUSE_INT32 -DUSE_INT64 -DUSE_LZMA -DUSE_LZO -DUSE_REFERENCE_COUNTING -DUSE_SHORTREAL_KERNELCACHE -DUSE_SNAPPY -DUSE_SPINLOCKS -DUSE_UINT16 -DUSE_UINT64 -DUSE_UINT8 -I/build/shogun-3.2.0/src -I/build/shogun-3.2.0/src/shogun
-I/build/shogun-3.2.0/debian/b\
uild/src -I/build/shogun-3.2.0/debian/build/src/shogun -I/usr/include/x86_64-linux-gnu -I/usr/lib/x86_64-linux-gnu/../include -I/usr/include/json-c -I/usr/include/libxml2 -I/usr/include/hdf5/serial -isystem /usr/include/eigen3  -std=c++11 -Wall -Wno-unused-parameter -Wformat -Wformat-security
-Wparentheses -Wshadow \
-Wno-unknown-pragmas -Wno-deprecated -g -g -O2 -fdebug-prefix-map=/build/shogun-3.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -fPIC   -o CMakeFiles/libshogun.dir/io/SerializableJsonFile.cpp.o -c
/build/shogun-3.2.0/src/shogun/io/SerializableJsonFile.cpp
/build/shogun-3.2.0/src/shogun/io/SerializableJsonFile.cpp: In member function 'virtual shogun::CSerializableFile::TSerializableReader* shogun::CSerializableJsonFile::new_reader(char*, size_t)':
/build/shogun-3.2.0/src/shogun/io/SerializableJsonFile.cpp:46:6: error: 'is_error' was not declared in this scope
   || is_error(buf)
      ^~~~~~~~
/build/shogun-3.2.0/src/shogun/io/SerializableJsonFile.cpp:46:6: note: suggested alternative: 'mc_error'
   || is_error(buf)
      ^~~~~~~~
      mc_error
/build/shogun-3.2.0/src/shogun/io/SerializableJsonFile.cpp: In static member function 'static bool shogun::CSerializableJsonFile::get_object_any(json_object**, json_object*, const char*)':

Cheers,
Sylvestre

--- End Message ---
--- Begin Message --- 
Source: shogun
Source-Version: 3.2.0-9

We believe that the bug you reported is fixed in the latest version of
shogun, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 912565@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Gianfranco Costamagna <locutusofborg@debian.org> (supplier of updated shogun package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Mon, 01 Jul 2019 08:22:58 +0200
Source: shogun
Binary: libshogun16 libshogun-dev shogun-doc-en shogun-doc-cn libshogun-dbg shogun-cmdline-static
Architecture: source
Version: 3.2.0-9
Distribution: unstable
Urgency: medium
Maintainer: Debian QA Group <packages@qa.debian.org>
Changed-By: Gianfranco Costamagna <locutusofborg@debian.org>
Description:
 libshogun-dbg - Large Scale Machine Learning Toolbox
 libshogun-dev - Large Scale Machine Learning Toolbox
 libshogun16 - Large Scale Machine Learning Toolbox
 shogun-cmdline-static - Large Scale Machine Learning Toolbox
 shogun-doc-cn - Large Scale Machine Learning Toolbox
 shogun-doc-en - Large Scale Machine Learning Toolbox
Closes: 912565
Changes:
 shogun (3.2.0-9) unstable; urgency=medium
 .
   * QA upload
   * debian/patches/38e580d6845351de258d1dded693321c7d94aa40.patch:
   * debian/patches/365ce4c4c700736d2eec8ba6c975327a5ac2cd9b.patch:
     - cherry-pick two upstream fixes for new json-c4 (Closes: #912565)
Checksums-Sha1:
 47e194f980536682c5eb873c1291ecf9caca3c10 2570 shogun_3.2.0-9.dsc
 345aad3ae8fad619df0e29e0e589e2c5043724ac 17364 shogun_3.2.0-9.debian.tar.xz
 46ba32d8c3d7f876d5de4062396eb74e857db573 11635 shogun_3.2.0-9_source.buildinfo
Checksums-Sha256:
 2b77fc68858e11512464f20fdc6f096d23cb038609d4ec47e697365c0af10b1f 2570 shogun_3.2.0-9.dsc
 9b3546523edc2726281d868238f3d4f504bf8eddd79bfbb6645e03b58c026285 17364 shogun_3.2.0-9.debian.tar.xz
 097e73385d0bd201470de9b9d64467f91a19521b78431fbd40c404c16c89928f 11635 shogun_3.2.0-9_source.buildinfo
Files:
 16cec9c8f99649eea14b5cf7eb83af7f 2570 science optional shogun_3.2.0-9.dsc
 d604ef3b0a247ff83e22f7e49006929b 17364 science optional shogun_3.2.0-9.debian.tar.xz
 133d1345202bd71480f9098841ac9081 11635 science optional shogun_3.2.0-9_source.buildinfo

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--- End Message ---
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