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Bug#841965: marked as done (nexus: Please support building against HDF5-1.10)



Your message dated Tue, 25 Oct 2016 22:43:29 +0000
with message-id <E1bzARN-0000CP-1i@franck.debian.org>
and subject line Bug#841965: fixed in nexus 4.3.2-svn1921-4
has caused the Debian Bug report #841965,
regarding nexus: Please support building against HDF5-1.10
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
841965: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=841965
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Source: nexus
Version: 4.3.2-svn1921-3
Severity: important
Tags: patch

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Hi,

Please find attached a patch to support building against HDF5-1.10 currently in experimental. I intend to request a transition slot this week, and will NMU if need be.

Thanks,

_g.

- -- System Information:
Debian Release: stretch/sid
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.6.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

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diff -Nru nexus-4.3.2-svn1921/debian/changelog nexus-4.3.2-svn1921/debian/changelog
--- nexus-4.3.2-svn1921/debian/changelog	2015-12-14 00:09:11.000000000 +0100
+++ nexus-4.3.2-svn1921/debian/changelog	2016-10-21 00:25:42.000000000 +0200
@@ -1,3 +1,9 @@
+nexus (4.3.2-svn1921-4) unstable; urgency=medium
+
+  * Fix HDF5 1.10 detection
+
+ -- Gilles Filippini <pini@debian.org>  Fri, 22 Jul 2016 23:05:27 +0200
+
 nexus (4.3.2-svn1921-3) unstable; urgency=medium
 
   * QA upload.
diff -Nru nexus-4.3.2-svn1921/debian/patches/fix-hdf5-1-10-detection.patch nexus-4.3.2-svn1921/debian/patches/fix-hdf5-1-10-detection.patch
--- nexus-4.3.2-svn1921/debian/patches/fix-hdf5-1-10-detection.patch	1970-01-01 01:00:00.000000000 +0100
+++ nexus-4.3.2-svn1921/debian/patches/fix-hdf5-1-10-detection.patch	2016-10-21 00:25:42.000000000 +0200
@@ -0,0 +1,13 @@
+Index: nexus-4.3.2-svn1921/configure.ac
+===================================================================
+--- nexus-4.3.2-svn1921.orig/configure.ac
++++ nexus-4.3.2-svn1921/configure.ac
+@@ -610,7 +610,7 @@ HDF5_API_DEFS="-DH5Acreate_vers=2 -DH5Ai
+ if test "$H5ROOT"; then
+     H5VERSION=`grep H5_VERS_INFO ${H5ROOT}/include/H5public.h | cut -d '"' -f 2 | cut -d ' ' -f 4`
+     case $H5VERSION in
+-	1.[[89]]*)
++	1.[[89]].*|1.10.*)
+     		HDF5_LDFLAGS=""
+ 		for j in lib lib64; do
+ 		    if test -d $H5ROOT/$j; then 
diff -Nru nexus-4.3.2-svn1921/debian/patches/series nexus-4.3.2-svn1921/debian/patches/series
--- nexus-4.3.2-svn1921/debian/patches/series	2014-04-16 22:00:58.000000000 +0200
+++ nexus-4.3.2-svn1921/debian/patches/series	2016-10-21 00:25:42.000000000 +0200
@@ -1 +1,2 @@
 0001-these-days-nexus-without-hdf5-is-considered-broken.patch
+fix-hdf5-1-10-detection.patch

--- End Message ---
--- Begin Message ---
Source: nexus
Source-Version: 4.3.2-svn1921-4

We believe that the bug you reported is fixed in the latest version of
nexus, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 841965@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Gilles Filippini <pini@debian.org> (supplier of updated nexus package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


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Format: 1.8
Date: Fri, 22 Jul 2016 23:05:27 +0200
Source: nexus
Binary: libnexus0v5 libnexus0-dev libnexus0-java python-nxs nexus-tools
Architecture: source amd64 all
Version: 4.3.2-svn1921-4
Distribution: unstable
Urgency: medium
Maintainer: Debian QA Group <packages@qa.debian.org>
Changed-By: Gilles Filippini <pini@debian.org>
Description:
 libnexus0-dev - NeXus scientific data file format - development libraries
 libnexus0-java - NeXus scientific data file format - java libraries
 libnexus0v5 - NeXus scientific data file format - runtime libraries
 nexus-tools - NeXus scientific data file format - applications
 python-nxs - NeXus scientific data file format - python binding
Closes: 841965
Changes:
 nexus (4.3.2-svn1921-4) unstable; urgency=medium
 .
   * QA upload.
   * New patch fix-hdf5-1-10-detection to support DF5 1.10 (closes: #841965)
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--- End Message ---

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