Next time help needed, now with a real Python library (pysam)
Hi folks,
since it worked out pretty well with my more simple question I'm
impudent enough to come up with a more tricky question: I need to
tackle
git://anonscm.debian.org/debian-med/pysam.git
as a predependency of another package but it seems I need to tweek
the build process initially says:
dh_auto_clean
Downloading http://pypi.python.org/packages/source/d/distribute/distribute-0.6.34.tar.gz
Traceback (most recent call last):
File "setup.py", line 131, in <module>
use_setuptools()
File "/home/tillea/debian-maintain/alioth/debian-med_git/build-area/pysam-0.7.5/distribute_setup.py", line 152, in use_setuptools
return _do_download(version, download_base, to_dir, download_delay)
File "/home/tillea/debian-maintain/alioth/debian-med_git/build-area/pysam-0.7.5/distribute_setup.py", line 131, in _do_download
to_dir, download_delay)
File "/home/tillea/debian-maintain/alioth/debian-med_git/build-area/pysam-0.7.5/distribute_setup.py", line 201, in download_setuptools
src = urlopen(url)
File "/usr/lib/python2.7/urllib2.py", line 127, in urlopen
return _opener.open(url, data, timeout)
File "/usr/lib/python2.7/urllib2.py", line 410, in open
response = meth(req, response)
File "/usr/lib/python2.7/urllib2.py", line 523, in http_response
'http', request, response, code, msg, hdrs)
File "/usr/lib/python2.7/urllib2.py", line 442, in error
result = self._call_chain(*args)
File "/usr/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/usr/lib/python2.7/urllib2.py", line 629, in http_error_302
return self.parent.open(new, timeout=req.timeout)
File "/usr/lib/python2.7/urllib2.py", line 404, in open
response = self._open(req, data)
File "/usr/lib/python2.7/urllib2.py", line 422, in _open
'_open', req)
File "/usr/lib/python2.7/urllib2.py", line 382, in _call_chain
result = func(*args)
File "/usr/lib/python2.7/urllib2.py", line 1222, in https_open
return self.do_open(httplib.HTTPSConnection, req)
File "/usr/lib/python2.7/urllib2.py", line 1184, in do_open
raise URLError(err)
urllib2.URLError: <urlopen error [Errno 111] Connection refused>
dh_auto_clean: python setup.py clean -a returned exit code 1
How can I prevent the build process from trying to download something
and start straightly using Debian packaged setup tools?
Once this probably simple question is solved I'd like to come up with a
more tricky one: The Python modules are using libraries which are
just packaged (samtools + tabix). I wonder how I could tweak the
build process to use the Debian packaged versions in favour of the
code copies here?
Kind regards
Andreas.
--
http://fam-tille.de
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