Re: Psortb has errors in Perl testsuite
On Wed, 19 Apr 2017 11:13:46 +0200, Andreas Tille wrote:
> I'd like to package psortb[1] which contains some Perl modules.
> Unfortunately the Build-Time test fails. My poor Perl knowledge tells
> me that this might be a path issue but my be I'm asking here for a hint
> how to solve this:
I don't think so. A path issue would lead to an error about a file
not found, something like
% perl -MBio::Tools::PSort::SVMLoc
Can't locate Bio/Tools/PSort/SVMLoc.pm in @INC (you may need to install the Bio::Tools::PSort::SVMLoc module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.24.1 /usr/local/share/perl/5.24.1 /usr/lib/x86_64-linux-gnu/perl5/5.24 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.24 /usr/share/perl/5.24 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base).
BEGIN failed--compilation aborted.
but what we have here is:
> # Failed test 'use Bio::Tools::PSort::SVMLoc;'
> # at t/svmloc.t line 11.
> # Tried to use 'Bio::Tools::PSort::SVMLoc'.
> # Error: Can't load '/build/psortb-3.0.4+dfsg/bio-tools-psort-svmloc/../blib/arch/auto/Bio/Tools/PSort/SVMLoc/SVMLoc.so' for module Bio::Tools::PSort::SVMLoc: /build/psortb-3.0.4+dfsg/bio-tools-psort-svmloc/../blib/arch/auto/Bio/Tools/PSort/SVMLoc/SVMLoc.so: undefined symbol: _ZN7DataSet12getAttributeEi at /usr/lib/x86_64-linux-gnu/perl/5.24/DynaLoader.pm line 187.
> # at t/svmloc.t line 11.
> # Compilation failed in require at t/svmloc.t line 11.
> # BEGIN failed--compilation aborted at t/svmloc.t line 11.
"… SVMLoc.so: … undefined symbol: _ZN7DataSet12getAttributeEi at /usr/lib/x86_64-linux-gnu/perl/5.24/DynaLoader.pm line 187."
Cheers,
gregor
--
.''`. https://info.comodo.priv.at/ - Debian Developer https://www.debian.org
: :' : OpenPGP fingerprint D1E1 316E 93A7 60A8 104D 85FA BB3A 6801 8649 AA06
`. `' Member of VIBE!AT & SPI, fellow of the Free Software Foundation Europe
`- BOFH excuse #378: Operators killed by year 2000 bug bite.
Reply to: