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[Pkg-octave-devel] Bug#514035: marked as done (octave3.0: glpk cannot find the octave runtime libraries)



Your message dated Thu, 05 Feb 2009 09:32:09 +0000
with message-id <E1LV0af-0004gE-O6@ries.debian.org>
and subject line Bug#514035: fixed in octave3.0 1:3.0.4~rc3-2
has caused the Debian Bug report #514035,
regarding octave3.0: glpk cannot find the octave runtime libraries
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
514035: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=514035
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: octave3.0
Version: 1:3.0.1-6lenny2
Severity: normal

Hi,

When glpk is called, it returnes

"octave: symbol lookup error:  /usr/lib/octave/3.0.1/oct/i486-pc-linux-gnu/__glpk__.oct: undefined symbol: _glp_lib_fault_hook"

and octave exits.

Running "ldd /usr/lib/octave/3.0.1/oct/i486-pc-linux-gnu/__glpk__.oct" shows 
"linux-gate.so.1 =>  (0xb7f84000)
libcruft.so => not found
liboctave.so => not found
liboctinterp.so => not found
..."

It seems it's looking for them in the usual place /usr/lib and not in /usr/lib/octave-$VERSION. 

Regards,
ST 
-- System Information:
Debian Release: 5.0
  APT prefers unstable
  APT policy: (900, 'unstable'), (500, 'experimental'), (500, 'testing'), (500, 'stable')
Architecture: i386 (i686)

Kernel: Linux 2.6.28-1-686 (SMP w/1 CPU core)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages octave3.0 depends on:
ii  libatlas3gf-sse2 [libl 3.6.0-22          Automatically Tuned Linear Algebra
ii  libblas3gf [libblas.so 1.2-2             Basic Linear Algebra Subroutines 3
ii  libc6                  2.7-18            GNU C Library: Shared libraries
ii  libcurl3-gnutls        7.18.2-8          Multi-protocol file transfer libra
ii  libfftw3-3             3.1.2-3.1         library for computing Fast Fourier
ii  libgcc1                1:4.3.3-3         GCC support library
ii  libgfortran3           4.3.3-3           Runtime library for GNU Fortran ap
ii  libglpk0               4.35-1            linear programming kit with intege
ii  libhdf5-openmpi-1.6.6- 1.6.6-4           Hierarchical Data Format 5 (HDF5) 
ii  liblapack3gf [liblapac 3.1.1-6           library of linear algebra routines
ii  libncurses5            5.7+20090124-1    shared libraries for terminal hand
ii  libpcre3               7.8-2             Perl 5 Compatible Regular Expressi
ii  libqhull5              2003.1-11         calculate convex hulls and related
ii  libreadline5           5.2-3.1           GNU readline and history libraries
ii  libstdc++6             4.3.3-3           The GNU Standard C++ Library v3
ii  libsuitesparse-3.1.0   1:3.1.0-3.1       collection of libraries for comput
ii  texinfo                4.11.dfsg.1-4     Documentation system for on-line i
ii  zlib1g                 1:1.2.3.3.dfsg-12 compression library - runtime

Versions of packages octave3.0 recommends:
ii  gnuplot                       4.2.4-4    A command-line driven interactive 
pn  libatlas3gf-base              <none>     (no description available)

Versions of packages octave3.0 suggests:
pn  octave3.0-doc            <none>          (no description available)
pn  octave3.0-emacsen        <none>          (no description available)
ii  octave3.0-headers        1:3.0.1-6lenny2 header files for the GNU Octave la
pn  octave3.0-htmldoc        <none>          (no description available)
ii  octave3.0-info           1:3.0.1-6lenny2 GNU Info documentation on the GNU 

-- no debconf information



--- End Message ---
--- Begin Message ---
Source: octave3.0
Source-Version: 1:3.0.4~rc3-2

We believe that the bug you reported is fixed in the latest version of
octave3.0, which is due to be installed in the Debian FTP archive:

octave2.9-doc_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9-doc_3.0.4~rc3-2_all.deb
octave2.9-emacsen_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9-emacsen_3.0.4~rc3-2_all.deb
octave2.9-headers_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9-headers_3.0.4~rc3-2_all.deb
octave2.9-htmldoc_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9-htmldoc_3.0.4~rc3-2_all.deb
octave2.9-info_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9-info_3.0.4~rc3-2_all.deb
octave2.9_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave2.9_3.0.4~rc3-2_all.deb
octave3.0-common_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave3.0-common_3.0.4~rc3-2_all.deb
octave3.0-dbg_3.0.4~rc3-2_amd64.deb
  to pool/main/o/octave3.0/octave3.0-dbg_3.0.4~rc3-2_amd64.deb
octave3.0-doc_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave3.0-doc_3.0.4~rc3-2_all.deb
octave3.0-emacsen_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave3.0-emacsen_3.0.4~rc3-2_all.deb
octave3.0-headers_3.0.4~rc3-2_amd64.deb
  to pool/main/o/octave3.0/octave3.0-headers_3.0.4~rc3-2_amd64.deb
octave3.0-htmldoc_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave3.0-htmldoc_3.0.4~rc3-2_all.deb
octave3.0-info_3.0.4~rc3-2_all.deb
  to pool/main/o/octave3.0/octave3.0-info_3.0.4~rc3-2_all.deb
octave3.0_3.0.4~rc3-2.diff.gz
  to pool/main/o/octave3.0/octave3.0_3.0.4~rc3-2.diff.gz
octave3.0_3.0.4~rc3-2.dsc
  to pool/main/o/octave3.0/octave3.0_3.0.4~rc3-2.dsc
octave3.0_3.0.4~rc3-2_amd64.deb
  to pool/main/o/octave3.0/octave3.0_3.0.4~rc3-2_amd64.deb



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 514035@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Rafael Laboissiere <rafael@debian.org> (supplier of updated octave3.0 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Wed, 04 Feb 2009 11:56:17 +0100
Source: octave3.0
Binary: octave3.0 octave3.0-doc octave3.0-htmldoc octave3.0-headers octave3.0-emacsen octave3.0-info octave2.9 octave2.9-doc octave2.9-htmldoc octave2.9-headers octave2.9-emacsen octave2.9-info octave3.0-dbg octave3.0-common
Architecture: source amd64 all
Version: 1:3.0.4~rc3-2
Distribution: experimental
Urgency: low
Maintainer: Debian Octave Group <pkg-octave-devel@lists.alioth.debian.org>
Changed-By: Rafael Laboissiere <rafael@debian.org>
Description: 
 octave2.9  - GNU Octave language for numerical computations (dummy package)
 octave2.9-doc - PDF documentation on the GNU Octave language (dummy package)
 octave2.9-emacsen - Emacs support for the GNU Octave language (dummy package)
 octave2.9-headers - header files for the GNU Octave language (dummy package)
 octave2.9-htmldoc - HTML documentation on the GNU Octave language (dummy package)
 octave2.9-info - GNU Info documentation on the GNU Octave language (dummy package)
 octave3.0  - GNU Octave language for numerical computations (3.0 branch)
 octave3.0-common - architecture-independent files for octave3.0
 octave3.0-dbg - Debug symbols for octave3.0
 octave3.0-doc - PDF documentation on the GNU Octave language (3.0 branch)
 octave3.0-emacsen - Emacs support for the GNU Octave language (3.0 branch)
 octave3.0-headers - header files for the GNU Octave language (3.0 branch)
 octave3.0-htmldoc - HTML documentation on the GNU Octave language (3.0 branch)
 octave3.0-info - GNU Info documentation on the GNU Octave language (3.0 branch)
Closes: 514035
Changes: 
 octave3.0 (1:3.0.4~rc3-2) experimental; urgency=low
 .
   [ Thomas Weber ]
   * Synch with the lenny branch.  In particular, let Octave provide the
     /usr/share/octave/packages/ directory (addresses Bug#513576), which
     should be in the octaveX.X-common package
 .
   [ Rafael Laboissiere ]
   * debian/in/PACKAGE-common.lintian-overrides: Add an override for the
     Lintian warning about the /usr/share/octave/packages/ empty directory
   * debian/patches/glpk-new-api.dpatch: New patch to avoid calls to
     deprecated __glp_lib_* functions which are deprecated and have been
     removed for the GLPK public API since version 4.32 (closes: #514035)
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Files: 
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--- End Message ---

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