Hi, Since htslib bump to version 1.16, ariba suffered from various issues raised in its test suite. I finally uploaded some long standing changes adjusting calls to the mpileup command, which migrated from samtools to bcftools, plus a workaround following some data test refresh needed after bowtie2 2.5.0 update. I also informed upstream of the remaining issues and fixes[1] slash workarounds[2]. [1]: https://github.com/sanger-pathogens/ariba/issues/327 [2]: https://github.com/sanger-pathogens/ariba/issues/329 Have a nice day, :) -- Étienne Mollier <emollier@emlwks999.eu> Fingerprint: 8f91 b227 c7d6 f2b1 948c 8236 793c f67e 8f0d 11da Sent from /dev/pts/2, please excuse my verbosity.
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