Re: Finishing ncbi-vdb and sra-sdk
Andreas Tille <andreas@an3as.eu> writes:
> I think ncbi-vdb version 3.0.0 is finished in Git. I'm just uploading it to
> experimental (needs to pass new queue due to the changed binary names). I
Thanks, but I still have some unpushed changes from some time back. As
noted at the time, I went to +dfsg2 to sidestep formal line-ending
discrepancies in files we don't actually need. I subsequently
considered devendoring more third-party code while I was at it, but
never found time; I suppose I should just proceed with what I have.
Sorry for sitting on them for so long; I've had a lot going on outside
Debian.
> VDB_LIBDIR="" does not exist - ncbi-vdb was not installed in that location.
Does -DVDB_LIBDIR=/usr/lib/${DEB_HOST_MULTIARCH} help?
Meanwhile, I'm concerned about how to handle ngs-sdk's incorporation
into sra-sdk 3.x, since sra-sdk needs ncbi-vdb libraries but ncbi-vdb at
least historically needed to build against ngs-sdk. Given the lack of
runtime dependency, it might just need headers, in which case splitting
them out into an architecture-independent binary package should help --
particularly if we can move sra-sdk's build dependencies on VDB
development packages to Build-Depends-Arch.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?amu@monk.mit.edu
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