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[Advent bug squashing]: Bug#999632: marked as done (r-bioc-isoformswitchanalyzer FTBFS: ERROR: dependencies ‘DRIMSeq’, ‘tximeta’ are not available)

Another bioconductor RC bug down. Thanks to FTP masters for accepting a pre-dep.

Regards,
Nilesh


-------- Forwarded Message --------
Subject: Bug#999632: marked as done (r-bioc-isoformswitchanalyzer FTBFS: ERROR: dependencies ‘DRIMSeq’, ‘tximeta’ are not available)
Date: Sat, 11 Dec 2021 21:45:05 +0000
From: Debian Bug Tracking System <owner@bugs.debian.org>
Reply-To: 999632@bugs.debian.org
To: Nilesh Patra <nilesh@debian.org>

Your message dated Sat, 11 Dec 2021 21:40:57 +0000
with message-id <E1mwA6z-0007gJ-7v@fasolo.debian.org>
and subject line Bug#999632: fixed in r-bioc-isoformswitchanalyzer 1.16.0+ds-1
has caused the Debian Bug report #999632,
regarding r-bioc-isoformswitchanalyzer FTBFS: ERROR: dependencies ‘DRIMSeq’, ‘tximeta’ are not available
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


--
999632: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=999632
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Source: r-bioc-isoformswitchanalyzer
Version: 1.14.0+ds-1
Severity: serious
Tags: ftbfs

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/r-bioc-isoformswitchanalyzer.html
https://buildd.debian.org/status/package.php?p=r-bioc-isoformswitchanalyzer&suite=sid

...
I: Using built-time from d/changelog: Tue, 28 Sep 2021 16:22:23 +0200
	mkdir -p /<<BUILDDIR>>/r-bioc-isoformswitchanalyzer-1.14.0\+ds/debian/r-bioc-isoformswitchanalyzer/usr/lib/R/site-library
	R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-isoformswitchanalyzer-1.14.0\+ds/debian/r-bioc-isoformswitchanalyzer/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 28 Sep 2021 16:22:23 +0200'"
ERROR: dependencies ‘DRIMSeq’, ‘tximeta’ are not available for package ‘IsoformSwitchAnalyzeR’
* removing ‘/<<PKGBUILDDIR>>/debian/r-bioc-isoformswitchanalyzer/usr/lib/R/site-library/IsoformSwitchAnalyzeR’
dh_auto_install: error: R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-isoformswitchanalyzer-1.14.0\+ds/debian/r-bioc-isoformswitchanalyzer/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 28 Sep 2021 16:22:23 +0200'" returned exit code 1
make[1]: *** [debian/rules:7: override_dh_auto_install] Error 25

--- End Message ---
--- Begin Message --- 
Source: r-bioc-isoformswitchanalyzer
Source-Version: 1.16.0+ds-1
Done: Nilesh Patra <nilesh@debian.org>

We believe that the bug you reported is fixed in the latest version of
r-bioc-isoformswitchanalyzer, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 999632@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Nilesh Patra <nilesh@debian.org> (supplier of updated r-bioc-isoformswitchanalyzer package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sun, 12 Dec 2021 02:12:12 +0530
Source: r-bioc-isoformswitchanalyzer
Architecture: source
Version: 1.16.0+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Nilesh Patra <nilesh@debian.org>
Closes: 999632
Changes:
 r-bioc-isoformswitchanalyzer (1.16.0+ds-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version 1.16.0+ds
   * d/control: Run dh-update-R
   * Add B-D on r-cran-drimseq (Closes: #999632)
Checksums-Sha1:
 8f0bf7bdbe6f55725309ac1c59bffbb5fbf43e0a 2745 r-bioc-isoformswitchanalyzer_1.16.0+ds-1.dsc
 fb5dfceba07e144b9a05fab6e487b1d38e9e7ab1 2721968 r-bioc-isoformswitchanalyzer_1.16.0+ds.orig.tar.xz
 0c574c627e1aa3b6665273c481d3fecf0903dd85 2660 r-bioc-isoformswitchanalyzer_1.16.0+ds-1.debian.tar.xz
 7c66b784ff70347c4bf2132f48a7fe6a208e503e 16069 r-bioc-isoformswitchanalyzer_1.16.0+ds-1_amd64.buildinfo
Checksums-Sha256:
 a533c9522d003bb10fb9bc256bc8af8a86d05ce075eecc481dcb0bc7803c426d 2745 r-bioc-isoformswitchanalyzer_1.16.0+ds-1.dsc
 cb95e23fd7ad16194f64066a2e8f51fb37c770d67469e898ac7c6da3313bc7f7 2721968 r-bioc-isoformswitchanalyzer_1.16.0+ds.orig.tar.xz
 70fd9be1e49ae2cacc75f416ba4081d46986171f7cad33aa0b60536d5d9a4a0f 2660 r-bioc-isoformswitchanalyzer_1.16.0+ds-1.debian.tar.xz
 97e7fb08dc98bf68b918d51dcb9cdc6e939b63e6237697333ab4d64839edb977 16069 r-bioc-isoformswitchanalyzer_1.16.0+ds-1_amd64.buildinfo
Files:
 ec8c5e7824ac94ddbaf48f278aee8603 2745 gnu-r optional r-bioc-isoformswitchanalyzer_1.16.0+ds-1.dsc
 c874d0c40a5e4760325895828ce05347 2721968 gnu-r optional r-bioc-isoformswitchanalyzer_1.16.0+ds.orig.tar.xz
 8ee69de571b03a7b6dc025001c982be6 2660 gnu-r optional r-bioc-isoformswitchanalyzer_1.16.0+ds-1.debian.tar.xz
 136e3c8bf8bc045f82dde51562579665 16069 gnu-r optional r-bioc-isoformswitchanalyzer_1.16.0+ds-1_amd64.buildinfo

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