Re: Any volunteer to check two (hdf5 relatet?) issues with python-biom-format
On Mon, 2021-10-18 at 12:30 +0200, Andreas Tille wrote:
> Hi,
>
> I wanted to update python-biom-format, but the build time test ends
> up in
>
>
> FAILED
> biom/tests/test_table.py::TableTests::test_from_hdf5_custom_parsers -
> ...
> FAILED
> biom/tests/test_table.py::TableTests::test_to_hdf5_missing_metadata_s
> ample
was already tested on python3 ?
One issue seems to be a comparison by bytes vs string(common error with
py3 transition):
E AssertionError: b'GUT' not found in ('GUT', 'SKIN')
>
>
> Any help would be welcome
>
> Andreas.
>
>
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Olivier Sallou
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