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Re: q2-diversity tests Re: report on first qiime tutorial with Debian packages



On 12/08/2021 19:16, Steffen Möller wrote:
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Ran 153 tests in 557.862s

Hi, Steffen.

QIIME/QIIME2 are notoriously sensitive to the versions of supporting programs so I think it is important to validate your packaging of QIIME2 against the same analysis using the upstream-supported Bioconda package.

I've taught QIIME2 using Jupyter Notebooks on Cyverse:

https://cyverse-jupyter-qiime2.readthedocs-hosted.com/en/latest/README.html

This was well received by the course participants in comparison to when they were just using the CLI.

HTH,

  Tony.

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