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Re: Autopkgtest for Yanagiba and unc-fish




On 31.07.21 14:47, Nilesh Patra wrote:
On 31/07/21 11:23 AM, Shruti Sridhar wrote:
yanagiba is almost ready, since you downloaded data from ncbi database,
can you write a script for fetching data by running it?
Just like the way I did it for pilercr[5]
I don't have a good idea of navigating this file at the right location
Note that doing this is ``optional``, and let me know if it cannot be done

I have  pushed the get-test-data script.
That would be in complete analogy to the createmanpages script (except
for the hyphens). I like that!
Could you please have a look at it?
Thank you!
Looks pretty good.

The fastq-dump command piped with head was giving me a weird SIGPIPE
error so I split it into two operations instead.
And the data seemed to have changed (just a little) so I updated this
and pushed.

Nice!

Steffen


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