On 31.07.21 14:47, Nilesh Patra wrote:
On 31/07/21 11:23 AM, Shruti Sridhar wrote:yanagiba is almost ready, since you downloaded data from ncbi database, can you write a script for fetching data by running it? Just like the way I did it for pilercr[5] I don't have a good idea of navigating this file at the right location Note that doing this is ``optional``, and let me know if it cannot be doneI have pushed the get-test-data script.
That would be in complete analogy to the createmanpages script (except for the hyphens). I like that!
Could you please have a look at it? Thank you!Looks pretty good. The fastq-dump command piped with head was giving me a weird SIGPIPE error so I split it into two operations instead. And the data seemed to have changed (just a little) so I updated this and pushed.
Nice! Steffen