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vcflib does not install scripts - missing bgziptabix



Hello,

cudaSV needs bgziptabix to be happy, which is how I became aware fo all
the scripts in

Med/libvcflib$ ls scripts/
bed2region      plotXPEHH.R       vcfindelproximity  
vcfnulldotslashdot      vcfregionreduce_and_cut
bgziptabix      vcf2bed.py       vcfindels          
vcfplotaltdiscrepancy.r      vcfregionreduce_pipe
plotBfst.R      vcf2sqlite.py    vcfjoincalls       
vcfplotaltdiscrepancy.sh   vcfregionreduce_uncompressed
plotHaplotypes.R  vcfbiallelic       vcfmultiallelic    
vcfplotsitediscrepancy.r   vcfremovenonATGC
plotHapLrt.R      vcfclearid       vcfmultiway          
vcfplottstv.sh          vcfsnps
plotPfst.R      vcfclearinfo       vcfmultiwayscripts 
vcfprintaltdiscrepancy.r   vcfsort
plot_roc.r      vcfcomplex       vcfnobiallelicsnps 
vcfprintaltdiscrepancy.sh  vcf_strip_extra_headers
plotSmoothed.R      vcffirstheader   vcfnoindels          
vcfqualfilter          vcfvarstats
plotWCfst.R      vcfgtcompare.sh  vcfnosnps           vcfregionreduce
Med/libvcflib$ du -sh scripts/
399K    scripts/

being plain missing in libvcflib1 . Should there be a libvcflib-bin
package? These scripts are expected to install together with vcflib, so
maybe having them recommended is a good idea? The vcftools package is
something independent.

debian/rules removes *.R files, so someone on this list knows more about
it all than me, please give some directions.

Best,
Steffen


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