Re: deblur - waiting for updated sortmerna
Hi Steffen,
On Mon, Jun 08, 2020 at 11:52:06PM +0200, Steffen Möller wrote:
> I just pushed deblur to salsa, a tool in the qiime2 realm. Its tests
> fail because our sortmerna is outdated (2.1, now at 4.2). This is
> because its d/watch file was trapped in the earlier tag format on github
> that started with the digit diretly, while anything since then has this
> "v"-prefix. I changed the watch line with how dh_make puts it which is
> "v"-agnostic.
>
> Sortmerna has changed quite a bit in the meantime, from what I observed.
> It is now a cmake project. Under my hand it does not compile because of
> using -lpthread instead of mere -pthread -did not find it. If this is
> easy for someone out here, please give it shot.
I tried to fix sortmerna but the patches do not apply. Since you
said you have problems with cmake I guess you have fixed patches
somewhere on your hard disk. Could you please push these?
Kind regards
Andreas.
--
http://fam-tille.de
Reply to: