Bug#928333: RM: htslib [i386 hurd-i386 kfreebsd-i386] -- ANAIS; ROM; *i386 no longer supported upstream

[Ivo De Decker <ivodd@debian.org>]

Control: retitle -1 RM: augustus, bedtools, cyvcf2, delly, dwgsim, fastqtl, hilive, nanopolish, qtltools, samtools, segemehl, smalt [i386] -- ANAIS; ROM; i386 no longer supported upstream

Hi,

On Thu, May 02, 2019 at 10:16:32AM +0100, Michael Crusoe wrote:
> Hello, this request is a repeat of https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=914991
> 
> The *i386 packages have somehow crept back in for all the reverse-(build-)deps of htslib binary packages.
> 
> Could the removal of *i386 binary packages that (build-)depend on any of the htslib binary packages be repeated?
> 
> Thanks. See also https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=927850

The list of source package that have binaries on i386 affected by this is:

augustus
bedtools
delly
dwgsim
fastqtl
hilive
nanopolish
qtltools
samtools
segemehl
smalt
cyvcf2

This results in the output below. Non of the affected sources have binaries on
i386, so these are false positives. I updated the subject of this bug to make
it clear what should be removed.

Please note that I restricted this to i386, because kfreebsd-i386 and hurd-386
will be removed from ftp-master soon anyway.

Thanks,

Ivo



Will remove the following packages from unstable:

  augustus | 3.3.2+dfsg-2 | i386
  bedtools | 2.27.1+dfsg-4 | i386
     delly |    0.8.1-2 | i386
    dwgsim |   0.1.12-2 | i386
   fastqtl | 2.184+dfsg-6+b1 | i386
    hilive |      1.1-2 | i386
nanopolish |   0.11.0-2 | i386
python-cyvcf2 |   0.10.8-1 | i386
python3-cyvcf2 |   0.10.8-1 | i386
  qtltools | 1.1+dfsg-3 | i386
  samtools |      1.9-4 | i386
  segemehl |    0.3.4-1 | i386
     smalt |    0.7.6-8 | i386

Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

------------------- Reason -------------------

----------------------------------------------

Checking reverse dependencies...
# Broken Build-Depends:
barrnap: bedtools
bcbio: python3-cyvcf2
       samtools
fastaq: samtools
freebayes: samtools
iva: samtools
     smalt
pbbam: samtools
python-gffutils: bedtools
python-pybedtools: bedtools
python-pysam: samtools (>= 1.9)
reapr: samtools (>= 1.3)
       smalt
roary: bedtools
sga: samtools
srst2: samtools
stacks: samtools
unicycler: samtools

Dependency problem found.