On Thu, Sep 27, 2018 at 01:37:37PM +0200, Liubov Chuprikova wrote:
> I got
> the following error:
>
> Error: Pilon was found (/usr/bin/pilon) but does not work - either fix it,
> specify a different location using --pilon_path or use --no_pilon to remove
> Pilon dependency
>
> So something might be wrong with pilon package. I tried to rerun the tests
> with --no_pilon option and got one more error:
I can confirm that my colleagues who tried a conda installation also
reported about issues with pilon
It is appered that pilon was missing jre in its dependencies and also it requires java-wrappers package. After the following changes I tested pilon by running unicycler's "Quick Usage" commands. It seems that everything works fine now.
Could you please check my commits [1] and make an upload to unstable?