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Re: Bug#865552: libbpp-phyl FTBFS with test failures



Dear Debian Med folks,

I have added some patches on the libppp-phyl package which remove some "deprecation" warnings. Such warnings were generated in loops during unit tests and might explain why some of them were reaching the timeout limit. Let's see if that improves things...

Best,

Julien.

On Thu, Jul 13, 2017 at 9:35 AM, Andreas Tille <andreas@an3as.eu> wrote:
Hi Julien,

your last change was in libbpp-seq so it does not really deal with the
fact that libbpp-phyl keeps on failing the test suite on mips and mipsel
architecture [1].

Could you please have another look into this issue?

Thanks a lot for your cooperation

      Andreas.


[1] https://buildd.debian.org/status/package.php?p=libbpp-phyl

> > > > >
> > > > > In this case:
> > > > >
> > > > >     gbp clone ssh://git.debian.org/git/debian-med/libbpp-phyl.git
> > > > >     # alternatively  git clone
> > > > >     cd libbpp-phyl
> > > > >     cp <your_patches> debian/patches/
> > > > >     echo <name_of_patch_files>  >> debian/patches/series
> > > > >     quilt push
> > > > >     quilt refresh
> > > > >     ... # until you dealt with all patches
> > > > >     quilt pop -a
> > > > >     git add debian/patches/*
> > > > >     dch -i
> > > > >      # add a changelog entry, close the bug
> > > > >     git commit -a
> > > > >     git push
> > > > >

--
http://fam-tille.de



--
Julien Y. Dutheil, Ph-D
0 (+49) 4522 763 298

§ Max Planck Institute for Evolutionary Biology
Molecular Systems Evolution
Department of Evolutionary Genetics
Plön -- GERMANY

§ Institute of Evolutionary Sciences - Montpellier
University of Montpellier 2 -- FRANCE

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