Re: Table Information extraction tools in DebianMed?
Hi Nikola,
thanks for your interest in Debian Med.
On Tue, Jul 19, 2016 at 12:15:34PM +0000, Nikola Milosevic wrote:
>
> I am a PhD student at the University of Manchester and during my PhD, I have developed a set of tools for processing, annotating and information extraction from tables in biomedical literature (currently supported XML formats of PubMedCentral and DailyMed). The tools can be found on GitHub and create a pipeline (one uses the output of the other):
> - https://github.com/nikolamilosevic86/TableAnnotator
> - https://github.com/nikolamilosevic86/Marvin
> - https://github.com/nikolamilosevic86/WIET---Wizard-for-Information-Extraction-from-Tables
>
> They are still under development, but are now quite stable and ready to be used. I would like to package these tools and include them into DebianMed distribution. I read the following page https://wiki.debian.org/DebianMed/MoM and I would be happy if someone can help me to start.
Fine. You can easily get the next MoM slot with one of the programs of
yours - preferably the most basic one. Please note: For Debian
packaging you need to get rid of *all* binary code from your source
tarball which are also *.jar files. I have not checked yet but usually
it happens that you need to start with packaging some Java precondition.
So feel free to add your name to the MoM table and start following the
Debian Med policy to create an account on alioth.debian.org to gain
commit permissions.
Kind regards
Andreas.
--
http://fam-tille.de
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