---------- Forwarded message ----------
From:
Jorge Soares <j.s.soares@gmail.com>Date: Wed, Oct 22, 2014 at 10:07 AM
Subject: ITP: fastaq -- FASTA and FASTQ file manipulation tools
To: Debian Bug Tracking System <
submit@bugs.debian.org>
Package: wnpp
Severity: wishlist
Owner: Jorge Soares <
j.s.soares@gmail.com>
* Package name : fastaq
Version : 1.5.0
Upstream Author : Martin Hunt <
mh12@sanger.ac.uk>
* URL :
https://github.com/sanger-pathogens/Fastaq/
* License : GPL
Programming Lang: Python
Description : FASTA and FASTQ file manipulation tools
All scripts automatically detect whether the input is a FASTA or FASTQ file.
Input and output files can be gzipped.
An input file is assumed to be gzipped if its name ends with .gz.
To gzip an output file, just name it with .gz at the end.
You can use a minus sign for a filename to use stdin or stdout, so scripts can be piped together.
A developer API is also provided by this package.
There are plenty of examples in tasks.py