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Re: bio-formats status



Morning Mathieu,

On Apr 11, 2012, at 10:13 PM, Mathieu Malaterre wrote:

> Josh,
> 
> On Wed, Apr 11, 2012 at 11:31 AM, Josh Moore <josh@glencoesoftware.com> wrote:
>> What are the issues you've run into for the other targets? Specific jars missing from Debian?
> 
> Looks like it. I am getting the following log:
> 
> https://alioth.debian.org/~malat/bf.log

There's no ome-xml section in your build output. When I grab the source code:

  cd bf.git
  git archive --prefix=bf431 v4.3.1 | (cd /tmp/ && tar xf -)
  cd /tmp/bf431
  ant | grep "=========="
     [echo] ----------=========== loci-common ===========----------
     [echo] ----------=========== jai_imageio ===========----------
     [echo] ----------=========== lwf-stubs ===========----------
     [echo] ----------=========== mdbtools-java ===========----------
     [echo] ----------=========== metakit ===========----------
     [echo] ----------=========== ome-xml ===========----------
     [echo] ----------=========== poi-loci ===========----------
     [echo] ----------=========== bio-formats ===========----------
     [echo] ----------=========== bf-autogen ===========----------
     [echo] ----------=========== loci_plugins ===========----------
     [echo] ----------=========== ome-editor ===========----------
     [echo] ----------=========== ome-io ===========----------
     [echo] ----------=========== ome_plugins ===========----------
     [echo] ----------=========== loci-testing-framework ===========----------

ome-xml is built before bio-formats. What happens if you try to build it directly? (`ant jar-ome-xml`)

Cheers,
~Josh.

> As a side note net-luminis-build-plugin is now in debian/main so
> things could improve.
> 
> -M


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