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Re: Bug#694632: Bug#684039: ITP: prime-phylo -- Bayesian estimation of gene trees taking the species tree into account

Hi Erik,

thanks for your work on prime-phylo.

On Mon, Dec 17, 2012 at 11:06:28AM +0100, Erik Sjölund wrote:
> I have now created:
> http://anonscm.debian.org/gitweb/?p=debian-med/prime-phylo.git

Looks good so far with one exception I've found:  Please check the copyright
by using

$ cme fix dpkg-copyright
Fixing from Dpkg::Copyright...
Configuration item 'Files:"src/cxx/libraries/prime/beep2blas.hh" License short_name' has a wrong value:
        value 'Software License for MTL' does not match grammar:

The syntax is not really DEP5 conformant.  I would have changed this
simply to "License: MTL" but when I checked the License paragraph I
detected some additional copyright statements which is somehow
confusing.  Does this mean the license is also copyrighted and has
some authors?  Could you please clarify this a bit?

Besides this I'd regard the package ready for upload and I'd go for
this once debian/copyright is passing cme.

> In the debian sub directory I also created the file
> upstream
> where I provided information about the scientific paper
> "Simultaneous Bayesian gene tree reconstruction and reconciliation analysis"
> I used utf-8 encoding to be able to write the name Åkerborg, Ö.
> Maybe utf-8 is not allowed for debian/upstream?

debian/upstream file should be UTF-8 - so all is fine here.

Kind regards



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