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Re: BLAST+ speed & build issues

I quickly build the ncbi-blast+ locally with static build using the
debian build process, and indeed,
static build binaries are much faster (blastx -h) than dynamically
linked ones.

I will investigate if there is a way to speedup this. Or if anyone has


Le 8/3/11 10:48 AM, Tim Booth a écrit :
> time bash -c 'for (( c=1; c<=50; c++ )) ; do ~/tings/ncbi-blast-2.2.25+/bin/blastx -h > /dev/null ; done'

Olivier Sallou
IRISA / University of Rennes 1
Campus de Beaulieu, 35000 RENNES - FRANCE

gpg key id: 4096R/326D8438  (pgp.mit.edu)
Key fingerprint = 5FB4 6F83 D3B9 5204 6335  D26D 78DC 68DB 326D 8438

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