Re: ensembl_57-7_amd64.changes ACCEPTED into experimental
Hi George,
this is really the work of Richard+Will at EagleGenomics, i.e.
two physical meetings with them to bring their scripts and
insights into a form that would be working with Debian. The
mail below does not reflect that, sorry.
EagleGenomics runs a very interesting symposium next week [1],
which not unsurprisingly takes time from the volunteer work
of theirs. Following that we should have some larger threads to
brainstorm about community work of ours to close the one or
other usage gap between what Ensembl provides and the packages
we already have in our distro.
Please stay in touch with whatever ideas or needs are popping
up on your side.
Best regards,
Steffen
[1] http://www.eaglegenomics.com/2011/01/symposium2011/
On 03/30/2011 04:58 PM, George Marselis wrote:
> great job, man. this will def minimize my headaches ...
>
> On Wed, Mar 16, 2011 at 1:37 PM, Steffen Möller <steffen_moeller@gmx.de>wrote:
>
>> Dear all,
>>
>> we can be very happy to now have Ensembl in our distribution. It is in
>> experimental since it depends on other packages that are still in
>> experimental. It is in non-free since we do not yet have Jalview packaged
>> but Ensembl ships the jalview.jar with it. So, there is some more work for
>> us to do.
>>
>> The bioperl1.2.3 package was once rejected since they did not like my
>> typical symlink hacks. This might need some extra talking with the
>> ftpmasters I did not yet find the time for, yet.
>>
>> What I'd now aim at are some more tools that use DAS, the distributed
>> annotation system. But this also depends on the feedback we get on the
>> Ensembl package, i.e. through the folks at EagleGenomics and other users.
>> Hm. Actually, we could think about a GSoC project addressing DAS in its many
>> flavours.
>>
>> So, congratulations to us all
>>
>> Steffen
>>
>> -------- Original Message -------- Subject: ensembl_57-7_amd64.changes
>> ACCEPTED into experimental Date: Wed, 16 Mar 2011 09:47:24 +0000 From: Debian
>> FTP Masters <ftpmaster@ftp-master.debian.org><ftpmaster@ftp-master.debian.org> To:
>> Steffen Moeller <moeller@debian.org> <moeller@debian.org>, Debian Med
>> Packaging Team <debian-med-packaging@lists.alioth.debian.org><debian-med-packaging@lists.alioth.debian.org>
>>
>> Accepted:
>> ensembl-bin_57-7_amd64.deb
>> to non-free/e/ensembl/ensembl-bin_57-7_amd64.deb
>> ensembl-doc_57-7_all.deb
>> to non-free/e/ensembl/ensembl-doc_57-7_all.deb
>> ensembl_57-7.debian.tar.gz
>> to non-free/e/ensembl/ensembl_57-7.debian.tar.gz
>> ensembl_57-7.dsc
>> to non-free/e/ensembl/ensembl_57-7.dsc
>> ensembl_57-7_all.deb
>> to non-free/e/ensembl/ensembl_57-7_all.deb
>> ensembl_57.orig.tar.gz
>> to non-free/e/ensembl/ensembl_57.orig.tar.gz
>> libensembl-compara-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-compara-perl_57-7_all.deb
>> libensembl-core-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-core-perl_57-7_all.deb
>> libensembl-draw-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-draw-perl_57-7_all.deb
>> libensembl-external-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-external-perl_57-7_all.deb
>> libensembl-functgenomics-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-functgenomics-perl_57-7_all.deb
>> libensembl-variation-perl_57-7_all.deb
>> to non-free/e/ensembl/libensembl-variation-perl_57-7_all.deb
>>
>>
>> Override entries for your package:
>> ensembl-bin_57-7_amd64.deb - extra non-free/utils
>> ensembl-doc_57-7_all.deb - extra non-free/doc
>> ensembl_57-7.dsc - extra non-free/science
>> ensembl_57-7_all.deb - extra non-free/science
>> libensembl-compara-perl_57-7_all.deb - extra non-free/perl
>> libensembl-core-perl_57-7_all.deb - extra non-free/perl
>> libensembl-draw-perl_57-7_all.deb - extra non-free/perl
>> libensembl-external-perl_57-7_all.deb - extra non-free/perl
>> libensembl-functgenomics-perl_57-7_all.deb - extra non-free/perl
>> libensembl-variation-perl_57-7_all.deb - extra non-free/perl
>>
>> Announcing to debian-devel-changes@lists.debian.org
>> Closing bugs: 589818
>>
>>
>> Thank you for your contribution to Debian.
>>
>>
>
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