On Wed, 6 Aug 2008, Charles Plessy wrote:
The embassy-phylip programs are EMBOSS conversions of the programs in Joe Felsenstein's PHYLIP package, a package of programs for inferring phylogenies. These programs all have the prefix "f" to distinguish them from the original programs.
Did you considered the chance to just use the xisting phylip package.
It uses a wrapper anyway so perhaps we could just tweak the wrapper.
Or we could do it the other way around: Find a way to use embassy-phylip
for plain phylip usage and adapt the wrapper. I do not really know the
difference between both so my idea might be naive - but at least checking
whether we could go with a single code base makes sense to me.
Greetings from Mar Del Plata
Andreas.
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http://fam-tille.de