Re: [cilibrar@cilibrar.com: Bug#425278: ITP: libqsearch -- hierarchical clustering library using quartet tree reconstruction algorithm]

[Andreas Tille <tillea@rki.de>]

On Mon, 21 May 2007, Charles Plessy wrote:

> this is definitely interesting for us. I will tag the ITP, and subscribe
> to it.

Charles, thanks for spotting this.

Rudi, are you aware of the Debian-Med effort.  If you need a sponsor
just ask here.  Perhaps you like to join the Debian-Med mailing list
to stay in contact with other Debian users and developers that work
in the same field you are obviousely interested in.

Kind regards

           Andreas.


> ----- Forwarded message from Rudi Cilibrasi <cilibrar@cilibrar.com> -----
>
> Date: Sun, 20 May 2007 18:10:02 +0200
> From: Rudi Cilibrasi <cilibrar@cilibrar.com>
> To: Debian Bug Tracking System <submit@bugs.debian.org>
> Subject: Bug#425278: ITP: libqsearch -- hierarchical clustering library using quartet tree reconstruction algorithm
>
> Package: wnpp
> Severity: wishlist
> Owner: Rudi Cilibrasi <cilibrar@cilibrar.com>
>
>
> * Package name    : libqsearch
>  Version         : 0.9.9
>  Upstream Author : Rudi Cilibrasi <cilibrar@cilibrar.com>
> * URL             : http://www.complearn.org/
> * License         : BSD
>  Programming Lang: C
>  Description     : hierarchical clustering library using quartet tree reconstruction algorithm
>
> libqsearch is a general-purpose data-mining library.  It creates a
> hierarchical clustering in the form of an unrooted binary tree based on
> an input square matrix of numbers.  No matter what kind of distance
> matrix you input into the system, it will search for the closest fitting
> unrooted binary tree that best represents the structural relationships
> between the objects as specified in the input matrix.  This package is
> useful with (and was once part of) the complearn package and is
> compatible with the text, CompLearn Binary, and Nexus file formats.  It
> outputs graphviz compatible .dot and Nexus format trees.  This system
> has been used for phylogenetic analysis of genetic sequences to
> reconstruct probable evolutionary histories, language analysis, and many
> other areas.
>
> -- System Information:
> Debian Release: 4.0
>  APT prefers unstable
>  APT policy: (500, 'unstable')
> Architecture: i386 (i686)
> Shell:  /bin/sh linked to /bin/bash
> Kernel: Linux 2.6.18-4-486
> Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
>
> ----- End forwarded message -----
>
> --
> Charles Plessy
> http://charles.plessy.org
> Wako, Saitama, Japan
>
>
> --
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